XLOC_010508


Basic Information

Item Value
gene id XLOC_010508
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 12563230 ~ 12566004 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021787
CTGCCACCGACTTGAGACGATGACATGGCtcggatgatgatgatgatgatgggggTTTGGGGCTGGTGCCCGTTGGCTGGACGAAATTAAAAATCCGCGGTGATGTAAACAGCTCTCACGGGATCGCATTCTTACCGTAAAAACGGCGGAATGAAACAGTTGACCGGAAGGGATGGAGATCTGGCACGTTGTCAAGAGACAACGCGGAAAAGAAAACACGCTTTTACAATAAGTGTGGATTAAAGACTTGATTTGACGTCAGTGCGCGTCTTGGGAATTTTTTTTCATATCCTCAAAAGCATGTACAACTAAACAAATGTGTAGGACTTGACGCCACTTCCATCCATGACTaaTAATACAGCCAGAGCATATTCACATGGTGACCTTTCCAGAGATAGATAAACATGGTTAAACATCCACCGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021787 True 423 lncRNA 0.45 2 12563230 12566004

Neighbor

gene id symbol gene type direction distance location
XLOC_010507 CU694256.1 coding downstream 31203 12524732 ~ 12532027 (-)
XLOC_010506 cox6b2 coding downstream 50637 12504929 ~ 12512593 (-)
XLOC_010505 slc2a3b coding downstream 66598 12474861 ~ 12496632 (-)
XLOC_010504 ephb6 coding downstream 93196 12335274 ~ 12470034 (-)
XLOC_010503 trpv6 coding downstream 243408 12294284 ~ 12319822 (-)
XLOC_010509 mfap5 coding upstream 103761 12669765 ~ 12689080 (-)
XLOC_010510 sbk3 coding upstream 144900 12710904 ~ 12723738 (-)
XLOC_010511 foxj2 coding upstream 192490 12758494 ~ 12787029 (-)
XLOC_010512 isoc2 coding upstream 227907 12793911 ~ 12809886 (-)
XLOC_010513 cacng8b coding upstream 316377 12882381 ~ 12953739 (-)
XLOC_010626 CR392024.2 misc upstream 8329108 20895112 ~ 20895175 (-)
XLOC_010500 CR388102.5 non-coding downstream 309759 12253415 ~ 12253471 (-)
XLOC_010499 CR388102.4 non-coding downstream 312907 12250268 ~ 12250323 (-)
XLOC_010498 CR388102.2 non-coding downstream 315310 12247862 ~ 12247920 (-)
XLOC_010497 CR388102.3 non-coding downstream 323770 12239407 ~ 12239460 (-)
XLOC_010517 NA non-coding upstream 874733 13440737 ~ 13480372 (-)
XLOC_010519 BX323458.2 non-coding upstream 956295 13522299 ~ 13542460 (-)
XLOC_010520 NA non-coding upstream 979289 13545293 ~ 13551327 (-)
XLOC_010521 NA non-coding upstream 990917 13556921 ~ 13564275 (-)
XLOC_010526 CR848741.1 non-coding upstream 1102162 13668166 ~ 13671219 (-)

Expression


Co-expression Network