XLOC_010520


Basic Information

Item Value
gene id XLOC_010520
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13545293 ~ 13551327 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021788
TGTTTTTATTGTCTTTTGCAGGTTTTGTATTAACAGTGATGGAACGCAGATGTACGAGTTCTGTGGTTGAAACAGCACAATGGGAACTAATTCCCCtcttacacaaacacaaagcTGCTGACAAAAGCAACAGCTTTTCTGCTGTACATAATGTGCTGCTGAAGGTCACTAGTTTTTACAAGCTCTATCAAGTACCTGTGGGGGAAGGTCTGGCCTTGTCACCCCTGTGAGAGAAAGAGGAGATAGGAGACACCGCACGTTACCCACCCAGTAGTGTCGCCTCTCAATGAATCTGTCAGCaggtgtgcgtatgtgtgtgtgtgtgtgtgtgagtgtgtacttgtttttgtgGATTACAAGTACACAAATTTGTATAGCGAAATGGGTATCACAACtttaaggtggtttatga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021788 True 412 lncRNA 0.43 2 13545293 13551327

Neighbor

gene id symbol gene type direction distance location
XLOC_010519 BX323458.2 coding downstream 2833 13522299 ~ 13542460 (-)
XLOC_010518 si:dkeyp-69b9.3 coding downstream 28548 13505064 ~ 13516745 (-)
XLOC_010517 NA coding downstream 64921 13440737 ~ 13480372 (-)
XLOC_010516 grin2db coding downstream 156472 13179146 ~ 13388821 (-)
XLOC_010515 prkcg coding downstream 435544 13020776 ~ 13109749 (-)
XLOC_010521 NA coding upstream 5594 13556921 ~ 13564275 (-)
XLOC_010522 ntd5 coding upstream 17370 13568697 ~ 13595027 (-)
XLOC_010523 dbpb coding upstream 48366 13599693 ~ 13613475 (-)
XLOC_010524 si:dkeyp-69b9.6 coding upstream 64912 13616239 ~ 13623928 (-)
XLOC_010525 shisa7a coding upstream 85377 13636704 ~ 13662514 (-)
XLOC_010626 CR392024.2 misc upstream 7343785 20895112 ~ 20895175 (-)
XLOC_010508 NA non-coding downstream 979289 12563230 ~ 12566004 (-)
XLOC_010507 CU694256.1 non-coding downstream 1013266 12524732 ~ 12532027 (-)
XLOC_010500 CR388102.5 non-coding downstream 1291822 12253415 ~ 12253471 (-)
XLOC_010526 CR848741.1 non-coding upstream 116839 13668166 ~ 13671219 (-)
XLOC_010530 NA non-coding upstream 306345 13857672 ~ 13860564 (-)
XLOC_010531 NA non-coding upstream 307580 13858907 ~ 13859312 (-)
XLOC_010535 BX005429.1 non-coding upstream 406429 13957756 ~ 13958885 (-)

Expression


Co-expression Network