XLOC_010531


Basic Information

Item Value
gene id XLOC_010531
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13858907 ~ 13859312 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022131
aatcTACAGGTAAAAACAGACAACACATGTACATCAACAACAGACGGATTGTTAAATTCGTTTGAGTAAAACGTGTTTGTAGTAGTAACCTTCTCTACAGGGATACTTGTAAACATGACTTTtgtaacttttttctttttatttcacagAGTAGCTTGCATCTGATGGTGCTGTGGTTCCTATGCTACAGTTTTACAGTTTCATATGGCTTGAATTTACTAAATGATAGATACAATCAGTGCAGACATG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022131 True 249 lncRNA 0.35 2 13858907 13859312

Neighbor

gene id symbol gene type direction distance location
XLOC_010529 leng9 coding downstream 40836 13810018 ~ 13818071 (-)
XLOC_010528 ttyh1 coding downstream 68999 13714058 ~ 13789908 (-)
XLOC_010527 ube2s coding downstream 178215 13672768 ~ 13680692 (-)
XLOC_010526 CR848741.1 coding downstream 187688 13668166 ~ 13671219 (-)
XLOC_010525 shisa7a coding downstream 196393 13636704 ~ 13662514 (-)
XLOC_010532 cdc42ep5 coding upstream 16555 13875867 ~ 13881156 (-)
XLOC_010533 rcvrn2 coding upstream 52380 13911692 ~ 13921589 (-)
XLOC_010534 si:dkey-85k15.4 coding upstream 96274 13955586 ~ 13965518 (-)
XLOC_010535 BX005429.1 coding upstream 98444 13957756 ~ 13958885 (-)
XLOC_010536 NA coding upstream 117068 13976380 ~ 14005609 (-)
XLOC_010626 CR392024.2 misc upstream 7035800 20895112 ~ 20895175 (-)
XLOC_010521 NA non-coding downstream 294632 13556921 ~ 13564275 (-)
XLOC_010520 NA non-coding downstream 307580 13545293 ~ 13551327 (-)
XLOC_010519 BX323458.2 non-coding downstream 316447 13522299 ~ 13542460 (-)
XLOC_010517 NA non-coding downstream 378535 13440737 ~ 13480372 (-)
XLOC_010539 NA non-coding upstream 229019 14088331 ~ 14090702 (-)
XLOC_010540 BX322530.1 non-coding upstream 234469 14093781 ~ 14167673 (-)
XLOC_010544 NA non-coding upstream 557034 14416346 ~ 14417407 (-)

Expression


Co-expression Network