XLOC_010529 (leng9)


Basic Information

Item Value
gene id XLOC_010529
gene name leng9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13810018 ~ 13818071 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020655
AGTGGCGTTTATGCACGTTGTCCCGGTAGTACACTATGAGTCATTTGTGGCAGATGATGTCATCCTGTACATGTTAACATTTAAACTAACCAGTCAACAAGCTAAGTTGTGTGATACTTTCTCGGGTTCTTCGAGTTGAAGCTCTGTTGAAGCTGTCAGACATGGAGATTGAGGAAGAGACAACTCGGGGAAACCCCACTGAGGAGTCTGATCAACAGATCCAGCCAGATGAGATTAAACAAGAAACTGGCCCAAATATTTGCCAGCACTTCCTCATGGGCAGATGTCATTTTGGAGACAGATGTCGTTTGTCTCACAGTGTGCTTGACGTCCCACAAACCACAAACTCCGAGAAAGACGATACAGCCGTCACAGAAAAGCAGAGCAAGAGCCgaaaaaatgggaaaaaatgtCACGCAGACATACAGCATGAAAAGATTGAGAAAAAAGGATCTAAGAAGAAGCCACGGATGCGTACAGCTGATGAAGTCATCTCCAGAATCATCTGGGATGCATCAGTGGACCCTGATGATTTTATAGTTGGCCACCTAGACCGCTTTCTAGGAGTGCTGGAACGCCCCTTCTCTGATTTCTCATGGGACACTCAGGTGTGTGACTGTGACTTCTCTGAAGAGCTGGCACTCCCTCGCCATAGGATCCAGTATTTCAGCTACAAAGGCCAGCGGGTGTGGGATAGAGACAGTCGCACTGATCGGGTCTTTGGCTCAACAGGCCAGACTATTTTGCCTCCTTTTTGTGGTGAAAATCAACAACAAGACAATCTAACATCTGACACTGGACAACAAGAAGAATCCACCAATGCAGCAGATGTTTCCACTGACCCTGATCAATCGACTGAATTATCTGAAGTACAGGATGATGTTGCATCTGTAATAACaccatcaaaaaacaaacaatcacagGGAGACGCCCTAAATCACTCAGCAAATGAAAACGCAGAGGAAGAAACCAAAGACCACATCCTACTCTCCCAAACAGAATCTGCACCAGAAGGCGAAAACACAGCAACTGCCGAAGATCCTACTTTAAATCATTTGGCTGGAAATCTGACTATCACTCAAAAAGATGAACAAGCGGAAATAGCGGAGGAATGGAAGGACAGCTGGGATGGAGTGAGTGGCTCAGAAGCAGAACTAGCGTCGGCCATCCTGCCACAACCACAGTCCAAACGGCCACCACCACGCAAGCCCACCCACTTCATCTGCTTCCGTGTGGATTCTCCCGCTGCTCTCCAGGCCTTCCAGCGAGTTCAGAGAAAAGTTCTGTCCACCCTCCCTCAGTCAGAGCCAATGTGGGTTAATCCGGCAACTTTACACGTCACCCTCTCCTTACTTGTGCTCAACAGTGCAGAGGAGGTCAGTGCTGCCGCTGAGCTCATGCGCACCATAGTCCGAAGCTCCCACAAACCTCCAATTTCCGTGACGTTCGCACCTAAACTGAAGCACTTTAATGGAACCGTTCTCCACGTAGTCCCACAGCCGTCCTCAGATGTGCAGAGTCTGAATTCGCCCCTTCAAGAAGCCTTCAAAGATAAAGGTTGGCTTCACCGGCATTCCCGATGCCCGTCGTACCATCTCACACTGGCCAAAGTGAAGAGGGAGCCCAAGGCTGAGAAGATGTTTGAAGGGATCGGGACTGTGAAATTGGCTAAAGATGTCAACTTTGGAAAGCTGGAAGTAAATAAGCTGTACCTTTGCGTGAAAGGTCAGAGAAACACGGAGAGTGGGTTCTATCAGGTTGTATGTGCCGTGCAGCTGCCCAATGTGTAGTGCCTGGATTTGTCACCTAAGCTGATTTTACCTACATCAAATACTTGATGTGTTTTTACTTAAATAAACAGTCTCATGATTCAAGACTTGAAGGCA
>TCONS_00020656
ATGCACGTTGTCCCGGTAGTACATTGAAGCTCTGTTGAAGCTGTCAGACATGGAGATTGAGGAAGAGACAACTCGGGGAAACCCCACTGAGGAGTCTGATCAACAGATCCAGCCAGATGAGATTAAACAAGAAACTGGCCCAAATATTTGCCAGCACTTCCTCATGGGCAGATGTCATTTTGGAGACAGATGTCGTTTGTCTCACAGTGTGCTTGACGTCCCACAAACCACAAACTCCGAGAAAGACGATACAGCCGTCACAGAAAAGCAGAGCAAGAGCCgaaaaaatgggaaaaaatgtCACGCAGACATACAGCATGAAAAGATTGAGAAAAAAGGATCTAAGAAGAAGCCACGGATGCGTACAGCTGATGAAGTCATCTCCAGAATCATCTGGGATGCATCAGTGGACCCTGATGATTTTATAGTTGGCCACCTAGACCGCTTTCTAGGAGTGCTGGAACGCCCCTTCTCTGATTTCTCATGGGACACTCAGGTGTGTGACTGTGACTTCTCTGAAGAGCTGGCACTCCCTCGCCATAGGATCCAGTATTTCAGCTACAAAGGCCAGCGGGTGTGGGATAGAGACAGTCGCACTGATCGGGTCTTTGGCTCAACAGGCCAGACTATTTTGCCTCCTTTTTGTGGTGAAAATCAACAACAAGACAATCTAACATCTGACACTGGACAACAAGAAGAATCCACCAATGCAGCAGATGTTTCC
>TCONS_00020657
CTACactgttttttttctattggTTTTAATCATTCACGTAGCCGTGTATATACACTAGCTATGAGTCATTTGTGGCAGATGATGTCATCCTGTACATGTTAACATTTAAACTAACCAGTCAACAAGCTAAGTTGTGTGATACTTTCTCGGGTTCTTCGAGTTGAAGCTCTGTTGAAGCTGTCAGACATGGAGATTGAGGAAGAGACAACTCGGGGAAACCCCACTGAGGAGTCTGATCAACAGATCCAGCCAGATGAGATTAAACAAGAAACTGGCCCAAATATTTGCCAGCACTTCCTCATGGGCAGATGTCATTTTGGAGACAGATGTCGTTTGTCTCACAGGTCTGTCAGTCACCGGATGGTAGAGACTCAACTAGTGAACTTATTGTGCTTGACGTCCCACAAACCACAAACTCCGAGAAAGACGATACAGCCGTCACAGAAAAGCAGAGCAAGAGCCgaaaaaatgggaaaaaatgtCACGCAGACATACAGCATGAAAAGATTGAGAAAAAAGGATCTAAGAAGAAGCCACGGATGCGTACAGCTGATGAAGTCATCTCCAGAATCATCTGGGATGCATCAGTGGACCCTGATGATTTTATAGTTGGCCACCTAGACCGCTTTCTAGGAGTGCTGGAACGCCCCTTCTCTGATTTCTCATGGGACACTCAGGTGTGTGACTGTGACTTCTCTGAAGAGCTGGCACTCCCTCGCCATAGGATCCAGTATTTCAGCTACAAAGGCCAGCGGGTGTGGGATAGAGACAGTCGCACTGATCGGGTCTTTGGCTCAACAGGCCAGACTATTTTGCCTCCTTTTTGTGGTGAAAATCAACA

Function

symbol description
leng9 Predicted to enable metal ion binding activity. Orthologous to human LENG9 (leukocyte receptor cluster member 9).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-607 Predicted to enable metal ion binding activity. Orthologous to human LENG9 (leukocyte receptor cluster member 9).

Ensembl:

ensembl_id ENSDARG00000062374

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020655 False 1886 mRNA 0.48 8 13810018 13818071
TCONS_00020656 False 724 mRNA 0.47 7 13811068 13818061
TCONS_00020657 True 841 nonsense_mediated_decay 0.46 6 13813970 13817940

Neighbor

gene id symbol gene type direction distance location
XLOC_010528 ttyh1 coding downstream 20110 13714058 ~ 13789908 (-)
XLOC_010527 ube2s coding downstream 129326 13672768 ~ 13680692 (-)
XLOC_010526 CR848741.1 coding downstream 138799 13668166 ~ 13671219 (-)
XLOC_010525 shisa7a coding downstream 147504 13636704 ~ 13662514 (-)
XLOC_010524 si:dkeyp-69b9.6 coding downstream 186090 13616239 ~ 13623928 (-)
XLOC_010530 NA coding upstream 39601 13857672 ~ 13860564 (-)
XLOC_010531 NA coding upstream 40836 13858907 ~ 13859312 (-)
XLOC_010532 cdc42ep5 coding upstream 57796 13875867 ~ 13881156 (-)
XLOC_010533 rcvrn2 coding upstream 93621 13911692 ~ 13921589 (-)
XLOC_010534 si:dkey-85k15.4 coding upstream 137515 13955586 ~ 13965518 (-)
XLOC_010626 CR392024.2 misc upstream 7077041 20895112 ~ 20895175 (-)
XLOC_010521 NA non-coding downstream 245743 13556921 ~ 13564275 (-)
XLOC_010520 NA non-coding downstream 258691 13545293 ~ 13551327 (-)
XLOC_010519 BX323458.2 non-coding downstream 267558 13522299 ~ 13542460 (-)
XLOC_010517 NA non-coding downstream 329646 13440737 ~ 13480372 (-)
XLOC_010535 BX005429.1 non-coding upstream 139685 13957756 ~ 13958885 (-)
XLOC_010536 NA non-coding upstream 158309 13976380 ~ 14005609 (-)
XLOC_010539 NA non-coding upstream 270260 14088331 ~ 14090702 (-)

Expression


Co-expression Network