XLOC_010537 (si:dkey-85k15.6)


Basic Information

Item Value
gene id XLOC_010537
gene name si:dkey-85k15.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13987735 ~ 13992646 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020666
GCAAAAGAAAAAtactgcaaaacaaaaaaaaatggctgTAAGggATCTGCAGTCTATGGAGATGGTTGTTGGGCCTCTGAATGATGGAATTATTTCTCTCTGTTATGTCTGCAAGCATCTTTTGGATGCACAAGTAGATCCAAATACTGGCATATGCTTCAATTATAGACAAATCAGAAGACATATTGAGTACGCTGAGCAGCACATTGCAAGATCAGAGAAAACTATTAAAGTAAAACTGCAAAATCTGGATGAACGTATGGAGCAACTTATTAAAGAACAGGGAAATGCTGAGCAGCAGAGGCGGCAGAAACGCCAGACCAAGAATGAATTGCATATCGAGAAGGATTCTGCTGAGGAATCATTAGAGAACTCTAGAGCAGCTTTGGAGCAGGCCAAAAAAAACGTGGCTTcagctaaaaaagaaaaagaaagagagatgcTCAGGGCGGTTAAAGGTGGAGTCGTAATGAATGCAGCAGCATGTGTTAGCATAATACCAATTGTTGGATGGCTTGTGGGTCCAGATATAATGATTGATGGATTTCATACAATGGCACATGCTTTAAATGCTATGATGGATGCTAAAGACGATCTTGAAGAAAATGAGTCCAGAGTGGGGAAGTACAAGAGAAAAGTGTCTGATTATCAGTCCAAGATCTCTAATATAGAGAGTGAGATTGAAGAAACTGATGAGTTGCTGGATAAAATTCAGAGTGAGATTGAAGAGGTGAAGCAGCATCTGGATTACACCGCTGATATTCAGGAGATGGTGAGAAAAGCTGTGAATCTTCTTAGCATTGTCAGTGGAAGAGTCACTGCTCTGCAGAGGCAAACCCGACGCTTCATCCTCTGGGAGCCTGTGATAA

Function

symbol description
si:dkey-85k15.6 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-100922-216 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000094385

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020666 True 869 mRNA 0.41 3 13987735 13992646

Neighbor

gene id symbol gene type direction distance location
XLOC_010534 si:dkey-85k15.4 coding downstream 22217 13955586 ~ 13965518 (-)
XLOC_010535 BX005429.1 coding downstream 28850 13957756 ~ 13958885 (-)
XLOC_010533 rcvrn2 coding downstream 66146 13911692 ~ 13921589 (-)
XLOC_010532 cdc42ep5 coding downstream 106579 13875867 ~ 13881156 (-)
XLOC_010530 NA coding downstream 127171 13857672 ~ 13860564 (-)
XLOC_010538 trim109 coding upstream 71751 14064397 ~ 14074594 (-)
XLOC_010539 NA coding upstream 95685 14088331 ~ 14090702 (-)
XLOC_010540 BX322530.1 coding upstream 101135 14093781 ~ 14167673 (-)
XLOC_010541 rnf115 coding upstream 238760 14231406 ~ 14248892 (-)
XLOC_010542 itga10 coding upstream 283718 14276364 ~ 14353567 (-)
XLOC_010626 CR392024.2 misc upstream 6902466 20895112 ~ 20895175 (-)
XLOC_010531 NA non-coding downstream 128423 13858907 ~ 13859312 (-)
XLOC_010526 CR848741.1 non-coding downstream 316516 13668166 ~ 13671219 (-)
XLOC_010521 NA non-coding downstream 423460 13556921 ~ 13564275 (-)
XLOC_010544 NA non-coding upstream 423700 14416346 ~ 14417407 (-)
XLOC_010545 BX324006.2 non-coding upstream 429154 14421800 ~ 14443389 (-)
XLOC_010551 CT573793.2 non-coding upstream 1715558 15708204 ~ 15709144 (-)

Expression


Co-expression Network