G284464


Basic Information

Item Value
gene id G284464
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 1068520 ~ 1069158 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU322426
ACCCTCTTGGGCACGGAGTTCACCAGAGCTTCACAGGTTGCCACTGGAGTCCTCTTCCACTCCTCCATGACGACATCACGGAGCTGGTGGATGTTAGAGACCTTGCGCTCCTCCACCTTCTGTTTGAGGATGCCCCACAGATGCTCAATAGGGTTTAGGTACCCTCAGCTTCTTTAGCAAGGCAGTGGTCATCTTGGAGGTGTGTTTGGGGTCGTTATCATGTTGGAATACTGCCCTGCGGCCCAGTCTCCGAAGGGAGGGGATCATGCTCTGTTGGCATTCATGGTTCCCTCAATGAACTGTAGCTCCCCAGTGCCGGCAGCACTCATGCAGCCCCAGACCATGACACTCCCACCACCATGCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322426 True 367 lncRNA 0.55 2 1068520 1069158

Neighbor

gene id symbol gene type direction distance location
CI01000072_00873737_00876816 NA coding upstream 191618 873737 ~ 876902 (+)
CI01000072_00847890_00857227 NA coding upstream 210621 847199 ~ 857899 (+)
CI01000072_00760940_00797319 BRIP1 coding upstream 271201 760940 ~ 797319 (+)
CI01000072_00629638_00638277 LHX1, LHX1A, LHX1.L coding upstream 429169 629638 ~ 639351 (+)
CI01000072_00603805_00621584 NA coding upstream 446687 602642 ~ 621833 (+)
CI01000072_01119954_01120757 NA coding downstream 50145 1119303 ~ 1120844 (+)
CI01000072_01145519_01157117 NA coding downstream 76361 1145519 ~ 1157875 (+)
CI01000072_01163522_01163779 NA coding downstream 93850 1163008 ~ 1163959 (+)
CI01000072_01183833_01210925 KIAA0753 coding downstream 114381 1183539 ~ 1212212 (+)
CI01000072_01238939_01264489 NA coding downstream 169271 1238429 ~ 1265465 (+)
G284338 NA non-coding upstream 212643 855530 ~ 855877 (+)
G284296 NA non-coding upstream 322548 745722 ~ 745972 (+)
G284121 NA non-coding upstream 400509 667773 ~ 668011 (+)
G284117 NA non-coding upstream 405645 662593 ~ 662875 (+)
G284550 NA non-coding downstream 264318 1333476 ~ 1333715 (+)
G284559 NA non-coding downstream 312585 1381743 ~ 1442788 (+)
G284696 NA non-coding downstream 517993 1587151 ~ 1590509 (+)
G284694 NA non-coding downstream 587694 1656852 ~ 1696292 (+)
G284851 NA non-coding downstream 762510 1831668 ~ 1831971 (+)
CI01000072_00338411_00351144 NA other upstream 717232 337071 ~ 351288 (+)
G284742 NA other downstream 912372 1981530 ~ 1985140 (+)
G285428 NA other downstream 2901099 3970257 ~ 3976214 (+)
G286470 NA other downstream 3099946 4169104 ~ 4175651 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other downstream 3155680 4224789 ~ 4268148 (+)
CI01000072_04338747_04342064 SDHD other downstream 3269561 4338719 ~ 4343266 (+)

Expression


Co-expression Network