G289379


Basic Information

Item Value
gene id G289379
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 1447045 ~ 1447257 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU328208
TAGAATGAAACTGGACGTTTCTGAATGGTTAGTGGATAAATTTATGTAGTTGCTGTGGAGTTGATTCAACTCATCGACTAGCATGTGCCGTCATGTTAATCTTTTGTGCAAATCCAGCATTGAATTGACCCTCGTTTGTGAAGCAGTCCGGCGTAAAATGACGGCATGTCAACAACACTCTACTACAACAACTCTTCCTCTTCTCTAAAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328208 True 213 lncRNA 0.41 1 1447045 1447257

Neighbor

gene id symbol gene type direction distance location
CI01000075_01404076_01444348 UNC13A coding upstream 2635 1404076 ~ 1444410 (+)
CI01000075_01364135_01365758 EEF2B, EEF2L2, EEF2.2, EF2, EEF2 coding upstream 81202 1364122 ~ 1365843 (+)
CI01000075_01159479_01160597 KLF2B coding upstream 286382 1159479 ~ 1160663 (+)
CI01000075_01033320_01042574 AP1M1.S, AP1M1 coding upstream 403350 1033220 ~ 1043695 (+)
CI01000075_01015651_01022674 NA coding upstream 424232 1015651 ~ 1022813 (+)
CI01000075_01451280_01460210 RAB11B.2.L, RB11B, RAB11B.1.S, RAB11B.2, RAB11B.1, RAB11B, RAB11BA, RAB11BB coding downstream 4023 1451280 ~ 1461636 (+)
CI01000075_01466937_01467865 NA coding downstream 19680 1466937 ~ 1468061 (+)
CI01000075_01506719_01516006 NA coding downstream 58953 1505543 ~ 1516053 (+)
CI01000075_01526289_01529484 POLR2E, POLR2EA, POLR2EB coding downstream 78984 1526241 ~ 1529656 (+)
CI01000075_01609077_01609286 NA coding downstream 161820 1609077 ~ 1610221 (+)
G289378 NA non-coding upstream 1177 1445490 ~ 1445868 (+)
G289377 NA non-coding upstream 1735 1445106 ~ 1445310 (+)
G289367 NA non-coding upstream 77504 1369117 ~ 1369541 (+)
G289334 NA non-coding upstream 130000 1295309 ~ 1317045 (+)
G289339 NA non-coding upstream 133237 1311275 ~ 1313808 (+)
G289340 NA non-coding downstream 18180 1465437 ~ 1466391 (+)
G289390 NA non-coding downstream 47156 1494413 ~ 1503903 (+)
G289397 NA non-coding downstream 69067 1516324 ~ 1516605 (+)
G289329 NA non-coding downstream 71733 1518990 ~ 1524862 (+)
CI01000075_00917306_00921588 NA other upstream 524629 917306 ~ 922416 (+)
G288755 NA other upstream 1139124 305108 ~ 316301 (+)
G288708 NA other upstream 1209774 235398 ~ 237271 (+)
G289319 NA other downstream 152924 1600181 ~ 1605306 (+)

Expression


Co-expression Network