G294094


Basic Information

Item Value
gene id G294094
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000081
NCBI id null
chromosome length 1644768
location 1509538 ~ 1511379 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU333834
AGTGACCATTGATGTCACAATCAGTAGCCAGAATCTTTCCACTAAAATTATTTTTTAAAATACAAACTCCGGCAGAATATTCATTTCCATGAGACATCCGCATTTCTAACCCCCATTGTGACCTCCATAAATTGACATCTTCTAAAGTTGAATGAGATTCTTGTAAAAAACAAAGATCTGTGTTGAAACTTTTAAGATACAGAAAGACTGCTTTACGCTTAAGAATGTTTCGTAGCCCTCTACAATTTAAAGAAATAATAGACAAAGACATAGAGAGAGAGAGAGAGAGATAAAAAAAAACAGAACAATAATAGAAGAACTAGTTCTAGGAACAAGTATAAAGGATTAAGTCACCGTGACAGAGAACCTAACCGGTCAGAACAAGCTTAATAGTAAGGGATGAGGTCAACAATCCCTTCATATATCGATCTAGAACATAAAGATGTTGAGGAACAACAACTATAATTCCCCCCTTTAAAGGGGTTGAAAAAACTCACATTGTTTACTTAAATCATTGAGAGTCTGAAATAATCATTTCTTTTAAAGGGATGTAAATAAAAAAGCTCAGGGAA
>TU333833
GGAACAAGTATAAAGGATTAAGTCACCGTGACAGAGAACCTAACCGGTCAGAACAAGCTTAATAGTAAGGGATGAGGTCAACAATCCCTTCATATATCGATCTAGAACATAAAGATGTTGAGGAACAACAACTATAATTCCCCCCTTTAAAGGGGTTGAAAAAACTCACATTGTTTACTTAAATCATTGAGAGTCTGAAATAATCATTTCTTTTAAAGGGATGTAAATAAAAAAGCTCAGGGAAGATGCAAATAAGAATGTTCAGGGAAGAAAAAAAAATAAGCGCATCACCGTCAGAAGTGGGTAATTTTTGGATCAAAGTTCCAGAATTCACGCACACATCAGTTCCAAGGTCAAGTTCGCAAAGCATCAGTCAAGCTGGAAAACAGATCCATTACATTTTAGACAGGAGGAAATATTTCCGTACCATCTACAAATGCTCGTCCGCCGACGAAAAAAGCCCTTTTGTTCTCTTTTCGAGCTTTTTCAACTATGGGCCAAAGCGTAATCCTCCTCGCTCTATCGGCCGGTGACAGGTCTTCCGTGATTTTCAGTCGGTTCTCAATCAGAAACTCAGCGTCCTTGGCGGCACGCCAGACAGCATCTCGGTAAAAATGCGAGGTGAACTGGAAGATGATTCCACGGGCTTTATTATTTGAATTAACACGGCCAAGTCGGTGTGCCACATCAACTACTTCAGGGAATTTATCTTTAAATTGTGGTAGAAGGCGTTGGCACACGTTGATAACCTCCTGGCGAACGTTTTCTCTCTCTTTCTCTGGAATTCCGTGGATTCTCAGGTTCCATCTGCGTGTGTAGGCTTCTAAATGAGCCAGGCGATTTTCTCGCTCAGTGAAGTTAATTTCTTCTTTCTTTGCGCGCGAGTCAATAGAATCAACTCTCTTTTTTTTCAAACTTTTAACCTCGCTGCAGACAAACTCAATGGTTTCCATCATTCCAGAGATTCGTTCCGTATTCCTGCAGATCTCCTCTTTCATATCTTTAATCACCCGCGAGTTTTCGCCAATCAACTTTTCCAAACCGTCTGATCTGTTTTTACCAGCTGCGAGAGCTCGGAGAGTTGTGTGGAAATAATCGCTGTATTTACGTTATCAGTTCTCCGAAGTTTAAAGGCCGGGGAATTGCACGGAGTGTCAGAAAGCGGCGGAATCACCTCCTCCACCAGCATAATCTCAGAATCATCATTTTGCTCACAATAATCATGCAGACTGTCCTTCAATACCCCGGTTGCAGGAGTACTGTTACGTAGTTCGGCTGCTTGTTTACCGTCACCTATGCTAGCAGAGCTAGCAGGAGTATCCGACACTGTTTTCCCTGACTTCTTCGCACCTTTCCTCTTTTCAGATCCTCCCATTGTTGTTGTTCAAAGAAATTCAAGACATTAATAAACAGAAATTCTCAAAAAATCCTCTAAAGTTTCGTTATAACTACTATAAAACAGTTTGGGATTGCCTAGCTCACAAATGTACATGTGATCAGGGCGCCATCTTGCA

Function

NR:

description
PREDICTED: probable global transcription activator SNF2L2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU333834 False 572 lncRNA 0.34 1 1509538 1510109
TU333833 True 1514 lncRNA 0.42 1 1509866 1511379

Neighbor

gene id symbol gene type direction distance location
CI01000081_01401235_01401648 NA coding upstream 107884 1401073 ~ 1401654 (+)
CI01000081_01241322_01259737 NA coding upstream 248268 1241322 ~ 1261270 (+)
CI01000081_01137104_01147739 NA coding upstream 361772 1137104 ~ 1147766 (+)
CI01000081_01120653_01123960 NA coding upstream 384889 1120603 ~ 1124649 (+)
CI01000081_01057614_01058675 NA coding upstream 450670 1056300 ~ 1058868 (+)
CI01000081_01536670_01610329 TAF6 coding downstream 25291 1536670 ~ 1610329 (+)
CI01000081_01612060_01612809 NA coding downstream 100681 1612060 ~ 1613912 (+)
G294091 NA non-coding upstream 2334 1506992 ~ 1507204 (+)
G294090 NA non-coding upstream 2641 1506409 ~ 1506897 (+)
G294085 NA non-coding upstream 14436 1494822 ~ 1495102 (+)
G294069 NA non-coding upstream 53288 1455988 ~ 1456250 (+)
G294054 NA non-coding upstream 74068 1435214 ~ 1435470 (+)
G294095 NA non-coding downstream 2189 1513568 ~ 1513957 (+)
G294097 NA non-coding downstream 4772 1516151 ~ 1517686 (+)
G294106 NA non-coding downstream 14679 1526058 ~ 1526865 (+)
G294116 NA non-coding downstream 109376 1620755 ~ 1621041 (+)
G294117 NA non-coding downstream 110328 1621707 ~ 1622120 (+)
G293747 NA other upstream 764023 737051 ~ 745515 (+)

Expression


Co-expression Network