XLOC_011014 (si:dkey-33i11.9)


Basic Information

Item Value
gene id XLOC_011014
gene name si:dkey-33i11.9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45172793 ~ 45178430 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021513
GACAGCAAAGTGACAAAGTCCGTGACTGACTGACACAGACTCCTCCGTCAGTGCGTGTCTTCCATTTCTCTAAAACCCATAGAAAACAAGTTTACCTGCTCAACCATGGATCCTCAAGAAAACTGGAATACATCAGAAAAAGCCAAACTGCTTCAGCCTGGACCTCCACCGTACCAGGATCATTCAACATGCCCCCCTCCAGGCAGCTTTCAGAGCACTTCTGGGTATCCAGCCCAGCAGTTTGGAGCTCCAGGACCATATCAAGGACCATATCCAGGCCATCAGGCGGTCACCGTACAGCCTGCGATTTATGTGACGGCCACTCCACTGGCTTATCCACTGCCAGATTACCTGGGCTACTCCATTTTCACCATGCTGTGCTGCTGCTTTCCTCTGGGTGTTGCTGCTCTGATTTACTCCATCAATACTCGCAACGCCAACATGTCTGGACATCAGCAATTAGCAGAGAGCAACTCCAAAACGGCACGCACTCTTAACCATACAGCTCTTGGTATCGGCTTGGCCTTTCTTGTGTTTTATATCGTCTACGTCGCTGTGATGGTTACCAACGCTCAGCATTCAACAGATCCATAATTGTCAGAGAAATCATGGCTGGACAACAggaaattgaagaaaaaatacaTGATGTAATGCCTCGGGAAtgttttataatcacattttgaTGTTTTTCTAGACCTTGAACTATCGTGCAACTTTATCTGTAGGAAATGATTATAGCTGATCTGTCTTACTCATCGTTAATAGATAAAGTAACTAACACATGATTTGAAAGTTGATTATCTAATGTTCCAAGAAATGCAAACTCCTGACTCTAATAGTTGATTATACAATGTTTCAAAAACTGTGACTTTAATAGAAAAGGTATAGTTGGTTGCTTTCTTTTCGTCCTGTGTAttgattaaatataattaattaaaatgtttttgaaaagttAAAA

Function

symbol description
si:dkey-33i11.9 Predicted to be integral component of membrane. Predicted to be active in membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-262 Predicted to be integral component of membrane. Predicted to be active in membrane.

Ensembl:

ensembl_id ENSDARG00000102555

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021513 True 958 mRNA 0.42 2 45172793 45178430

Neighbor

gene id symbol gene type direction distance location
XLOC_011013 si:ch73-343g19.4 coding downstream 20624 45149355 ~ 45152169 (-)
XLOC_011012 FP085399.5 coding downstream 28421 45140858 ~ 45144372 (-)
XLOC_011011 FP085399.3 coding downstream 38314 45130921 ~ 45134479 (-)
XLOC_011010 FP085399.2 coding downstream 66219 45104613 ~ 45106574 (-)
XLOC_011009 si:rp71-77l1.1 coding downstream 74087 45087810 ~ 45098706 (-)
XLOC_011016 FP085399.4 coding upstream 8243 45186673 ~ 45193152 (-)
XLOC_011017 fxyd1 coding upstream 24172 45202602 ~ 45225520 (-)
XLOC_011018 si:dkey-33i11.4 coding upstream 49671 45228101 ~ 45235947 (-)
XLOC_011019 FP016247.2 coding upstream 63951 45242381 ~ 45245742 (-)
XLOC_011020 hpn coding upstream 70625 45249055 ~ 45288599 (-)
XLOC_010626 CR392024.2 misc downstream 24277618 20895112 ~ 20895175 (-)
XLOC_011005 BX511252.1 non-coding downstream 154253 45018424 ~ 45018540 (-)
XLOC_011004 NA non-coding downstream 158313 45012914 ~ 45014480 (-)
XLOC_011023 NA non-coding upstream 613955 45792385 ~ 45795127 (-)
XLOC_011027 NA non-coding upstream 804043 45982473 ~ 45994189 (-)
XLOC_011028 NA non-coding upstream 909059 46087489 ~ 46097432 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location