XLOC_011020 (hpn)


Basic Information

Item Value
gene id XLOC_011020
gene name hpn
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45249055 ~ 45288599 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021522
GACAAGAGCCGGAAAACAGAAGCTTCATTTAACACCAAATAAAAGAGCCTTAGACTCCGGGGAAACGGAAATGTCAGCGCGAATATCTGAAGAAAACAACTGATTAACGTTTTTTTCAGCTCTTTGTTACTTATTCACGAGTTTATTCAAGAAGCTGAAGTGAAGAGGTGGAGGTCTGAAAGAACATCAAGTCGGATTTTTTGAGGAGGAATCATCTATTGGAAGCTTATATTTCAGCTTTCTTATTTGGATGAACATGTCAGAGAAGAAGGTCGGACGTCCAGGCATGAGCATCTTCAGTCCATGCCGGGTGGTCGCTGCAGTTTCTCTGATCTTGATTATTCTGGGAGGGCTGGGAGCCGCCATCTGGGCCCTCGtCACGTACCTTAGAACAACAGAGGATACAGGATTATTTGATGTGCAGGTGAGTGCAGCAGACCAGAGGCTGAGAGTGTTTGACTCCACACAGTGGAGGTGGAAATATGTTTGCTCATCCAGTGTCAACCAGCTCATCGCCAACATCACCTGCGAGGAGATGGGCTTCGTTAGAGCAGTAAATTTCTCAGTGACGTGTGCTCCTGAGAGTGGCGGGGACCGAGATTTTTTCTGTGTAAAAGAGAGCGAGTTAACATATGGGAAGAAGATAAAAACAGCCCTCTATCCTTGTAAATGTGACAAAGGGCAGATTCTTGAGGTGATCTGTCAGGACTGTGGTCGTCGAATGCTGCCTGAGGAGCGGATAGTGGGGGGAGTGGATGCTCGACAGGGCTCGTGGCCATGGCAGGTCAGCTTACAGTATGATGGAGTTCATCAGTGTGGTGGATCCATCATTTCAGACCGCTGGATCATCAGTGCTGCACACTGCTTTCCTGAGAGGTATCGTCACGCATCCCGCTGGCGGGTTCTGATGGGCTCGATCTACAACACTCCCATCCGTAAGAATGTTGTGATCGCAGAGGTGAAGACGGTCGTCTACCACAGCAGTTACCTGCCCTTCGTCGACGCtaatattgatgataacagtcggGACATTGCAGTCATCTCATTGACGAAACCTCTGCAGTTCACTGATTATATCCAGCCCGTGTGTCTTCCGACCTACGGCCAGCGTTTGGCAGACGGACAGATGGGTACAGTTACTGGCTGGGGTAACGTGGAGTATTATGGAACTCAAGCAAATGTCCTCCAGGAGGCCCACGTGCCCATCATCAGTGATGCGGTGTGCAATGGCCCTGATTATTATGACAACCAGGTCACAACCACCATGTTCTGTGCTGGTTATGAGAAAGGAGGAACAGACTCATGCCAGGGGGACAGCGGTGGACCTTTCGTAGCAGCAGATGTGCTCTCTAAGACCAGCCGCTATCGTCTGCTGGGAGTTGTAAGCTGGGGCACAGGCTGTGCTATGGCCAAGAAGCCTGGCGTTTACACACGTGTGTCCCGCTTTCTGCCGTGGATTTCAACTGCTATGAGGATGTATGAGAATTCCCCAGGAGTGCACAAAATGGCACGAGCCGCCACACCATAGTAATTCACAACGGAACATGTTGTATTTGAGACTGAAGTATTGATGTGTTGCTGGGATCGGTCTGAGATCAGACGTCTGCTGTGGATCAGATGTTTTGAGATGATCAAACTGGCTCAAGGACATTTGGCTAATAACTTTCGCTTGGTCTGACCCAAGGAGGGccttgatgatgatgaagatgctgTACTTTGGGTTTAATATGTTTATGAACACCTCATTTGTACAAAACCTAAAACCTTTTCCTGACATCAAAATGTGGCAGATACAGTATGGAAATTACTCactgaaacttaaaaaaaaaaaacttgctttataTAGAGATGGTACTGTTTAAAGGTTTAGTATTGGTTTGTTTTTGATAGAAGTCTCTCTCGCTcgccaaagctgcatttatttgctcAGAGTACAAAAACACAGTAATATAGAAAAATTTGTAAAAGATGTTAATATGTTGAAAACGTTAAAATGATCGTCCAGTTTGATACTTGTTTCAGCTTCAAATTGTTGTGGAAACTTTATTACTTTTTAGGATTCGTTGATGAATCCAAAGTTCAAAATAATAGCacttatttgaaatgtattttcaaCATGAAACTTTTTTACTGTAACTTTTGATTGATTCATTGTGTTcttgatgaaaaaaataacattttaaaaatccttTATAATATTTcagtaattaattttaaataaaaatgtaattttcacTAAAGAAAGTTTTGAATATTGataataagcaaaaaaaatcttaataatcaATAAACCAGCaagaaacaagaaaacaaaatctttaaaataaataaatcggcATATTATAACTTCTGAAAGATCCTGTGATACTGAAGACTACAATAATGATGCACTAAATTCAACTTTCCATCACAagaatttaaagtttaaaatgttcACATGGAAAATAGCTACGATAggatttatacatatataataatattctgttttattacatttttttattaaatatattaattcttGCTGAGCAGAGGActcttttttttaactcaaacatTCAAAAATAACCAATATCAAACTGTTTGAATGGTAGTTTATATGAAAAAACATTCAAGGATATTTTTATCCTATTTGTCCTGTAGGTTTGTACAGACTGTAAGGTAGCAAGACGGATTAAATCTGTGATCAGTTTCAGCTCTAGTTAGATTGAAATTTCTGTTTTTCGTTCATGCATctgaaaaaatacaattaatatttaagaaataGAATGCTccagaaattaaaaaaagtacAATGTGTTTTAGCACATTCTGAGATCTAAGAAGTAGGGGTGTGCGATATTGCCAAAATCTaagtatatctaaaaaaaaattttgtaatgattaaattatattttgttgaaTATGTGTGTTGCACTACAACCTTTTAGGCCTCTCATTGAGAAACACATATGACACTAAAACCATCAATAGGTGATTGCAACTCCAATGCTGAGCCCAAATTCACTTACTTAAACTTAGTCTTAAAACCATCAACCTTATTTGTAAAGAAAAACATACTTTGAGTGGGTAACAAAAGAGTATGCAAGCATTGAGACATACTACCTGCTCATTCTTAGATCATTTTTTTGCTTAGTAACATGCACTGTCAATCATAATGAAACATCATCCACATTCTTTCATATAAAATGTCCTAGCATATactaaagcagcagcagcagcagcagatggaTCTGCCATTCATGAGTCTTTCAtgtagagaaatctcctcaggtgtttGCTTATTTGCGCATTTAGAAGTTAATGGCCAAACACGCCTGAACAAAGTTCacattgttgcagatgaaatatgaAGAATACGAAGagcgatttaaatattttccagctTAGATATTAATTAGCATGTAGTCCTTCAAGCAGCTTTACCAAAGCCTCTCCACTTAACAGTCAGTCTCATGcatccaccatgtttgtagttcaACACTTTTTACCcacatttgtagttctaattgaATTCATGTCTGATGCGCAATGTATTGTCGGCAATATTAGCTATAAGAGTAAGCACAGATCTACATTTCCAATTTCTACCAGAAATAGTAGACCATCCAAGTAACTTTGAAATACTCAAAACATCATACTACGAATTGGGACATACCAATTCtattttcgaatactatttaggaAATAGTATGTGAATTTGGATGCAGCACTTGTCATAATGAGTGATTTAATTGATGACTCTTTTTACGAGCTCAATTAATTAAAAAGCAGAATCATTCAGCAGCGAAACACTACAGTGTTCTTCTGAGACGCACAAATGTTCTGCACCACCTTTAAAGGACAGTTTTCTTgtgcaaaacagaaaaaaagaagaaaataagtaTCACATTTGTGATCACACATGCTATGACAACGTTAGTGTGatattattatgatatattgtaaatatatattacaataaacaACATCGAAGAATATTTTTGGTTCTCGTAACTTTAAATATAGTCATTCTAACAGGCTTCATGTTGCAGTGAATGCTTTTGATCttcgtttatttgtttgctagttttTTTTGCAAAGTAAGTGACATATTCAATAATGTCTTACACTGTTAAGAAGTACAATTTTAATATCATAaaccagtggttcttaaacttttttcaccaagtaccacctcagaaaaaaaaattgtctctccaagaaCCACCATAATCAGGggtattgaaataaagtagcgtagttggccgaattaagcagctacagcactgcacagttcgaaaACGAGGCAGAGTCATATTCATTCAACGAcattatattccatacaaaatagaaagctgatcagtcagttcttgtcacgtgactcgcggtgcAGCATTCTGAAAAGGTAGGATGTTTTCAACTGTGCACGCCTGGAATACACAAATGCGTCATGCTGCagtactcattttgctagcctgtgggttGAATTGtggcactcaagtgaccgagatgtaacgagagaatacggtcatttttgaaaataaaagatttttttttttaaatgaacgatCGTTCAGACTTAGattataaataaaacggaaataattaatgattttttgtgcGACCCGGTACCAATTGAACTATAGACCATTGCTTGTTTGTGGCCCGAGGGTTTGAGACCACTGCTCTATCaagtatctgctctgcaagcaccacgcacctctttctctagttctgcACCAATTAAATAGATTTATAGCAGCTGATGATgcgatgcactaaagtaaacattttacgCACATCGCTTTGATTgtaggctttagagaacagctaatgctgatcacattggtgttattGTACGAATCAAATTCATTGCTCAGTGATTCCTCCGCTCACCACTAGAAGTAAGCTTTGAGAACCTCAGTCATAGACAATAAATATCACACACCCCTACTGACAATAACTCTCGCCTTTATCTCACTCTTCAGTATTTATCTCAATTTTGTTTACTAGCGGTACACCTacagtataataatattattaataatattaataataataatgaagcatATAAATCAAATCTTTATGACAAACAGAAGTTTACTGAATAATACAGGCCTTTGTCAAATGTGCCATGATGTACTTCAATAGGTTTTATAAAAGTAAAATGGCCAGAACGCTGACATTTATAAATGTTCGTTGAAAACTACATACCTTTgtgtatttagctttttttttttttcttaaaaggaataaaaagcaataaaaaccaAAGACTGGTTCAGAGAGCAGTATGCATAAACTCTTTGCTGTGGCAGTCAGTATTGTTGCGTATATTGTTGTCACTGTTGTACATATAATGGCTTCTTTGCTATGCAATGCACTGTTTAATTCAATTGTATGTCTAATTTTATGTTCAGCTGCTACAGTGTGTGTTTATCCAGATGTTGTATCATAACATTGAGAGTAACATTTGTAGTAATTTGGTAATGCTTTAGGTCAAATATTACGACAATAAAACATACAACTTA

Function

symbol description
hpn Predicted to enable scavenger receptor activity; serine-type endopeptidase activity; and serine-type exopeptidase activity. Acts upstream of or within blood coagulation, fibrin clot formation and regulation of serine-type endopeptidase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human HPN (hepsin).

GO:

id name namespace
GO:0072378 blood coagulation, fibrin clot formation biological_process
GO:1900003 regulation of serine-type endopeptidase activity biological_process
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0070008 serine-type exopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function
GO:0005044 scavenger receptor activity molecular_function

KEGG:

id description
ko05203 Viral carcinogenesis
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-141212-373 Predicted to enable scavenger receptor activity; serine-type endopeptidase activity; and serine-type exopeptidase activity. Acts upstream of or within blood coagulation, fibrin clot formation and regulation of serine-type endopeptidase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human HPN (hepsin).

Ensembl:

ensembl_id ENSDARG00000027609

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021522 True 5510 mRNA 0.37 13 45249055 45288599

Neighbor

gene id symbol gene type direction distance location
XLOC_011019 FP016247.2 coding downstream 3313 45242381 ~ 45245742 (-)
XLOC_011018 si:dkey-33i11.4 coding downstream 13108 45228101 ~ 45235947 (-)
XLOC_011017 fxyd1 coding downstream 23535 45202602 ~ 45225520 (-)
XLOC_011016 FP085399.4 coding downstream 55903 45186673 ~ 45193152 (-)
XLOC_011014 si:dkey-33i11.9 coding downstream 70625 45172793 ~ 45178430 (-)
XLOC_011021 si:dkey-33i11.1 coding upstream 14497 45303096 ~ 45327616 (-)
XLOC_011022 rgl2 coding upstream 75554 45364153 ~ 45398408 (-)
XLOC_011023 NA coding upstream 503786 45792385 ~ 45795127 (-)
XLOC_011024 ntrk1 coding upstream 508003 45796602 ~ 45854882 (-)
XLOC_011025 afp4 coding upstream 615554 45904153 ~ 45910050 (-)
XLOC_010626 CR392024.2 misc downstream 24353880 20895112 ~ 20895175 (-)
XLOC_011015 FP085399.6 non-coding downstream 74495 45174446 ~ 45174560 (-)
XLOC_011012 FP085399.5 non-coding downstream 104683 45140858 ~ 45144372 (-)
XLOC_011011 FP085399.3 non-coding downstream 114576 45130921 ~ 45134479 (-)
XLOC_011027 NA non-coding upstream 693874 45982473 ~ 45994189 (-)
XLOC_011028 NA non-coding upstream 798890 46087489 ~ 46097432 (-)
XLOC_011029 NA non-coding upstream 907526 46196125 ~ 46203345 (-)
XLOC_011030 BX537142.1 non-coding upstream 928209 46216808 ~ 46216909 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location