CI01000097_00115317_00182129 (ANGPT1)


Basic Information

Item Value
gene id CI01000097_00115317_00182129
gene name ANGPT1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000097
NCBI id null
chromosome length 390960
location 115317 ~ 182129 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000097_00115317_00182129.mRNA
ATGTGGTTTGTGTGGCGCTGCGCGTCCCTGGCGGCGCTGCTGGTGGTAGCAGACTGTGGAGGAGCTGAGCAAAGAAGAACAGCAGAAGAAGGACTCAGAAGCTCCACGGCGAAATCCACCGGCAACAGCAGCAGCGGTCGGAAATATCACCGGATCCAACACGGACAGTGCAGCTACACTTTTATCCTTCCGGAGGGCGATGGAGGAGCTTGTCGAGAGTTTAAAGCGGGCACGACGTACAATGCCAACACACTTCAGCGGGACGCACCTCAACCTGAAGCTGACTTCTCCAACCAGAAGATCCAGCAGCTGGAGAACGTCATGGAGAACTACACACAGTGGTTACAAAAGATTGAGAACTACGTTAAAGACAATATGAAGACAGAAATGGTGCAGTTACAACAGAGTGCCGTCCACAACCACACAGCGGCCATGTTAGAGATGGGCACCAGTCTTCTCTCCCAAACAGCCGAGCAGACGCGCAAGCTGACCGATGTCGAGACACAGGTTTTAAATCAGACATCACGGTTGGAAATTCAGCTGCTGGAGAATTCACTATCAACCAACAAGTTGGAGAAACAACTTATGATTCAGATCAATGAAATCAACAAGATCCATGACAAGAATGGGTTTCTGGAGGTGAAGATGCAGGAGATGGAGGACAGGCACCGGGAGGAGCTGGAGGCCGTGCGGGAGGAGAAGGTCAGTCTGCAGGCGCTGGTCAGCAGACAGAGCGCAGTGATCCGGGAGCTGGAGGCTCAGCTGACCCGAGCCAGCGGGAACAGCAGCGCCCTGCAGAGACAACAGCAGGACCTGATGGACACCGTACGCAACCTGCTCAGCCTCTGTGCCAAGGATGGAGGCACCGCATGTAAGCACACATCACTCGCTGATTTATTCATGGAGAGAAAGAACTTGAAATTTATAGCTTGTAGTATTTTGTCCGCAGACTCTTGCTTGGTTTCAAAATATTGGCGGTGTAATTGTCTGCAGATGGAAAGAGACGCAGCTGTGTACTGCAACATGGAGTCTGCGGGCGGAGGCTGGACCGTCATCCAAAGACGTGAAGATGGCAGCGTGGACTTCCAGAGAACATGGAAGGAATATAAAATGGGCTTTGGGAGCGTGTCGGCCGAGCACTGGCTGGGAAATGAGTTTGTGCACATTCTGACCAATCAGAGGCAGTTTGCCCTCCGTGTGGAGCTGACCGACTGGGACGGACACCAGGCCTTCTCTCAGTATGACAGTTTCCACATCGACAGTGAAAAACACAATTACAGATTGTTCCTGAAGAGCCACAGCGGGACGGCAGGCAGGCAGAGCAGTCTGGCCATCCACGGCGCTGACTTCAGCACTAAAGACATGGACAATGACAACTGCACATGCAAGTGTGCTCTGATGCTCAGCGGGGGATGGTGGTACGATGCCTGCGGTCCATCCAACCTGAACGGTGTGTACTACAGACAAGGACAACACGTTGGAAAATTCAATGGAATCAAGTGGCACTATTTCAAAGGCCCGAGCTACTCTCTCCGATCCACGGTCATGATGATCCGACCGGCCGACTTCTCG

Function

symbol description
angpt1 Predicted to enable receptor tyrosine kinase binding activity. Acts upstream of or within blood vessel development and brain development. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including brain; cardiovascular system; hypochord; medial longitudinal fasciculus; and ventral mesenchyme. Human ortholog(s) of this gene implicated in brain ischemia; diabetic retinopathy; and hypertension. Orthologous to human ANGPT1 (angiopoietin 1).

GO:

id name namespace
GO:0007420 brain development biological_process

KEGG:

id description
K05465 ANGPT1; angiopoietin 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000097_00115317_00182129.mRNA True 1572 mRNA 0.53 9 115317 182129

Neighbor

gene id symbol gene type direction distance location
CI01000097_00095560_00100777 NA coding downstream 14522 95266 ~ 100795 (-)
G312838 NA non-coding downstream 24348 53946 ~ 90969 (-)
G312878 NA non-coding upstream 137396 319525 ~ 323591 (-)
G312879 NA non-coding upstream 141662 323791 ~ 330633 (-)
G312877 NA non-coding upstream 153098 335227 ~ 343029 (-)
G312875 NA non-coding upstream 161018 343147 ~ 343961 (-)
G312909 NA non-coding upstream 195736 377865 ~ 378260 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015050 angpt1 coding NC_007130.7 CM002903.2 46812272 ~ 46957968 (-)