G314202


Basic Information

Item Value
gene id G314202
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 2011377 ~ 2011594 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU357242
GTCCCCCTCTCTCTTGATGGAAGTGAGCACAGAACTGATCAGGCATTTCCAGGGGTATTCCTGGCAGGAAGAGCACCACTCAGTGAACAGACTTCACTTCAAAGTACAGTGTTGGGGAGTAGCTAGCTACAAGTAGTGACGCTACTAGCTTAACTACATTTTTCAGTAGCTTGTCAGTAGCTCAGTTACTTTTAAAACAGGGTAGCTTTTTCAATAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU357242 True 218 lncRNA 0.45 1 2011377 2011594

Neighbor

gene id symbol gene type direction distance location
CI01000098_01960410_01996273 HRH3 coding upstream 14979 1960410 ~ 1996398 (+)
CI01000098_01900523_01905648 ABCF3.S, ABCF3 coding upstream 105422 1900523 ~ 1905955 (+)
CI01000098_01894500_01898605 ABCF3 coding upstream 112772 1894500 ~ 1898605 (+)
CI01000098_01875234_01882514 RPB4, POLR2D, BRAFLDRAFT_113736, POLR2D.L coding upstream 128714 1874547 ~ 1882663 (+)
CI01000098_01788449_01870321 CACNA1E coding upstream 140563 1788342 ~ 1870814 (+)
CI01000098_02037636_02051827 NA coding downstream 26006 2037600 ~ 2051846 (+)
CI01000098_02167217_02267829 NA coding downstream 155623 2167217 ~ 2267829 (+)
CI01000098_02304073_02309499 RPE65, RPE65A coding downstream 291461 2303055 ~ 2309573 (+)
CI01000098_02447543_02468822 C8A coding downstream 435949 2447543 ~ 2468987 (+)
CI01000098_02542022_02543246 NA coding downstream 528393 2539987 ~ 2543545 (+)
G314142 NA non-coding upstream 102307 1908541 ~ 1909070 (+)
G314122 NA non-coding upstream 273352 1730722 ~ 1738025 (+)
G314120 NA non-coding upstream 288827 1722272 ~ 1722550 (+)
G314118 NA non-coding upstream 290816 1720293 ~ 1720561 (+)
G314203 NA non-coding downstream 236 2011830 ~ 2012374 (+)
G314204 NA non-coding downstream 909 2012503 ~ 2012717 (+)
G314194 NA non-coding downstream 3996 2015590 ~ 2020393 (+)
G314196 NA non-coding downstream 8882 2020476 ~ 2023927 (+)
G314231 NA non-coding downstream 58908 2070502 ~ 2073767 (+)
G314121 NA other upstream 250405 1755140 ~ 1760972 (+)
G313412 NA other upstream 1145430 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 1736120 274731 ~ 275712 (+)
G314278 NA other downstream 217730 2229324 ~ 2234831 (+)
G314652 NA other downstream 1189926 3201520 ~ 3204360 (+)

Expression


Co-expression Network