G314120


Basic Information

Item Value
gene id G314120
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 1722272 ~ 1722550 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU357147
TTAAAATATAATGTATTTCTGTGATGCAAAGCATCTGAACATTAATGTTACCTCTATGGCATTTCATGTAGGCTATTATATTTGTTATATTATATAGCCTAAATGTTAATGTGCAGTTGACAAACTATACATCATTAAAAAGATCTAAGACTCAAGCTTCACATTTTGACCTCTGTTTTACTCTTATAGTGACCGTAATTTGTTAATAGCCTTTGCGTCAAGAGTTATGAATATGAAAAACGGAGTCGTTACCTTTGACAAAACAACATCCATCAGGGC

Function

NR:

description
uncharacterized protein LOC109909784

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU357147 True 279 lncRNA 0.32 1 1722272 1722550

Neighbor

gene id symbol gene type direction distance location
CI01000098_01617418_01644911 WRNIP1 coding upstream 76413 1617055 ~ 1645859 (+)
CI01000098_01491396_01493506 NA coding upstream 228448 1491114 ~ 1493824 (+)
CI01000098_01294815_01296281 FOXC1.S, FOXC1, FOXC1A coding upstream 425516 1293068 ~ 1296756 (+)
CI01000098_01280234_01281476 NA coding upstream 440356 1280234 ~ 1281916 (+)
CI01000098_01226066_01228884 FOXF2, FOXF2A coding upstream 493264 1225504 ~ 1229008 (+)
CI01000098_01732302_01733453 NA coding downstream 9708 1732258 ~ 1733530 (+)
CI01000098_01788449_01870321 CACNA1E coding downstream 65792 1788342 ~ 1870814 (+)
CI01000098_01875234_01882514 RPB4, POLR2D, BRAFLDRAFT_113736, POLR2D.L coding downstream 152065 1874547 ~ 1882663 (+)
CI01000098_01894500_01898605 ABCF3 coding downstream 171950 1894500 ~ 1898605 (+)
CI01000098_01900523_01905648 ABCF3.S, ABCF3 coding downstream 177973 1900523 ~ 1905955 (+)
G314118 NA non-coding upstream 1711 1720293 ~ 1720561 (+)
G314113 NA non-coding upstream 7797 1713867 ~ 1714475 (+)
G314090 NA non-coding upstream 60263 1661775 ~ 1662009 (+)
G314083 NA non-coding upstream 63576 1658361 ~ 1658696 (+)
G314075 NA non-coding upstream 72558 1649463 ~ 1649714 (+)
G314122 NA non-coding downstream 8172 1730722 ~ 1738025 (+)
G314142 NA non-coding downstream 185991 1908541 ~ 1909070 (+)
G314202 NA non-coding downstream 288827 2011377 ~ 2011594 (+)
G314203 NA non-coding downstream 289280 2011830 ~ 2012374 (+)
G313412 NA other upstream 856325 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 1447015 274731 ~ 275712 (+)
G314121 NA other downstream 32590 1755140 ~ 1760972 (+)
G314278 NA other downstream 506774 2229324 ~ 2234831 (+)
CI01000098_02167217_02267829 NA other downstream 525566 2167217 ~ 2267829 (+)
G314652 NA other downstream 1478970 3201520 ~ 3204360 (+)

Expression


Co-expression Network