G314203


Basic Information

Item Value
gene id G314203
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 2011830 ~ 2012374 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU357243
TTTCACTTGAATCGACTATAAGTTATGCAAACTAGATGTTAAAACGCTGTCTACGTCGAAGACTTAAAGCACATACAGGAGGTGAATAATATATTTTTTAAAATTGATCAGTTATCCTGCTTTATTGCTCTCTACATCAAATTTCTGTTTCTGATTTAATTACAAAGATGACCCGCCATGGTTTAATCTGTCCTGCCACAGTTTTGTAATGAACCTAAAGATCACTAACGTTAATTGAACAGAAAATTAAATTGCGAAATAGTAGTGCACTTATCACTTGGCAAAGACTGGTTGTGGCGGGATTCCAAGCACTCACTGTGTTCATGCGAGCAACTCATGATTGGCGTCTCAGAGCAATATAAATTGCATGATTGGCATCTCAGAGCAATGTTCAATATAAATGCTGCGCGCTCCATCACTGAATGTGCTGTGAGTTTAACCTGCATTTTTGACTACTCCTGAGTATTTAATTTATGGTGCATACATTTTGTTCTTGCACTGATGATACATTTGTAGCAGTTTTGTACTTTGACAGCCAATTTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU357243 True 545 lncRNA 0.37 1 2011830 2012374

Neighbor

gene id symbol gene type direction distance location
CI01000098_01960410_01996273 HRH3 coding upstream 15432 1960410 ~ 1996398 (+)
CI01000098_01900523_01905648 ABCF3.S, ABCF3 coding upstream 105875 1900523 ~ 1905955 (+)
CI01000098_01894500_01898605 ABCF3 coding upstream 113225 1894500 ~ 1898605 (+)
CI01000098_01875234_01882514 RPB4, POLR2D, BRAFLDRAFT_113736, POLR2D.L coding upstream 129167 1874547 ~ 1882663 (+)
CI01000098_01788449_01870321 CACNA1E coding upstream 141016 1788342 ~ 1870814 (+)
CI01000098_02037636_02051827 NA coding downstream 25226 2037600 ~ 2051846 (+)
CI01000098_02167217_02267829 NA coding downstream 154843 2167217 ~ 2267829 (+)
CI01000098_02304073_02309499 RPE65, RPE65A coding downstream 290681 2303055 ~ 2309573 (+)
CI01000098_02447543_02468822 C8A coding downstream 435169 2447543 ~ 2468987 (+)
CI01000098_02542022_02543246 NA coding downstream 527613 2539987 ~ 2543545 (+)
G314202 NA non-coding upstream 236 2011377 ~ 2011594 (+)
G314142 NA non-coding upstream 102760 1908541 ~ 1909070 (+)
G314122 NA non-coding upstream 273805 1730722 ~ 1738025 (+)
G314120 NA non-coding upstream 289280 1722272 ~ 1722550 (+)
G314204 NA non-coding downstream 129 2012503 ~ 2012717 (+)
G314194 NA non-coding downstream 3216 2015590 ~ 2020393 (+)
G314196 NA non-coding downstream 8102 2020476 ~ 2023927 (+)
G314231 NA non-coding downstream 58128 2070502 ~ 2073767 (+)
G314191 NA non-coding downstream 99256 2111630 ~ 2130258 (+)
G314121 NA other upstream 250858 1755140 ~ 1760972 (+)
G313412 NA other upstream 1145883 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 1736573 274731 ~ 275712 (+)
G314278 NA other downstream 216950 2229324 ~ 2234831 (+)
G314652 NA other downstream 1189146 3201520 ~ 3204360 (+)

Expression


Co-expression Network