CI01000105_01080311_01083160


Basic Information

Item Value
gene id CI01000105_01080311_01083160
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000105
NCBI id null
chromosome length 3526334
location 1079401 ~ 1083160 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000105_01080311_01083160.mRNA
CAGTCATGCTCTGTGAGGAGTCGTCAGCTGGGCTCACTGCTGCTCTGGATTCTGTGGTTCGGCTGAAACCTGACACTGAGACCTCCACAGATCCTGTGCAGGAAGTCATTCACTGTAGCACTTATGTTTCCTCTGTCATCCCTGCACATGGAGGCATCAGTCTGAACAGCGAGGAGCCGTTCTGTCGTATCTGTCATGAAGGCAGCAGTGCGGGTGATCTGTTATCGCCCTGTGAGTGTGCCGGGTCTCTGGCAATGGTGCACCGTGTTTGTCTGGAGCACTGGCTCACGGCCTCCGGCACCAGCCACTGCGAGCTCTGCCACTTTCAATTCGCTCTGGAGAGACTTCCCAAACCGCTCACGGAGGTACAGTAAAATCCAGTCCAGTCACTTGATGCCATATACACTGTATACACTTGATTTTAGTAAACTAAACTTAATTGACTACAAATATTTTATTTATTTTTAAATAAAAATGTTTAAATTAAAATAAATAATTTTTTCATTTGCTGCTTTGCTGTTCAGACAAATTCAAGTGTTTTGGCAGTCATAGATAGATCCATAAAATGTATGCTAATAGTTATGTTACAGTAAGTGCCAGTTTGCACAAGAGTAAGTATTCAGCCACTCTTGATTTTCAATGCAAAATTATTTTTTAAGGTAGTTCCATTTGCTATAATTTTGCACTTTTAGCAGGTGGTTAAACTGCATCTTAGGCACAGACTCTTCTATTTCTCCTAATTGTTGATATGGAAACGCAGATATTGTCTGATCTCAGCTGACGCATAATTCACTACGGGTCTGTCAGTCTGCCCTCACAAAGGACTTTAGAGTTTATTTAGAGACATAAAGAGATGTAAAACTGGGTATATAATAACATACTCTCTGCAGTAGTCACATGGAATGTGTTTTAACCAACATTATCAGCTCCGTTCTCCTGGAGTCACTCACTCTTGAGTCCCGACTCATGTCTCGGCCTCACTTTAAGGCACACAGCAGATATTGGCAGGTCTGCTTTACCTCGGCTTCTTTTAAACACTAATCCACTTAGCAGGAAAATGAGATTAGATGAGGAACGTATCCCTGTCGCTGCAGAGGCCTGGACATGCCGCTTTATTCATGTCCTTATCTCATGTTTGGGCCTGAGGACGAGATGATGACACTAGAGTCCGTGTGCATCAGGACCTGTTGAGACACAAACAGATCGAGAGCAATATTATGACGGATTCTAATACAACCGATTTTCATTAGTTTTACTTCTGCATGATCATTAGAATACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000105_01080311_01083160.mRNA True 1284 mRNA 0.43 2 1079401 1083160

Neighbor

gene id symbol gene type direction distance location
CI01000105_01047496_01049681 NA coding downstream 29720 1047484 ~ 1049681 (-)
CI01000105_00872764_00976679 ADAMTSL3, ADAMTSL1 coding downstream 102722 872384 ~ 976679 (-)
CI01000105_00820704_00861875 EFL1, EFTUD1 coding downstream 217526 820575 ~ 861875 (-)
CI01000105_00665697_00668298 MEX3B.S, MEX3B coding downstream 411103 665554 ~ 668298 (-)
CI01000105_00449773_00454701 NA coding downstream 624700 449773 ~ 454701 (-)
CI01000105_01104888_01119177 SH3GL3A, SH3GL3 coding upstream 21410 1104570 ~ 1119177 (-)
CI01000105_01181447_01186008 RPLP2, RPLP2L coding upstream 98262 1181422 ~ 1186008 (-)
CI01000105_01364107_01364379 NA coding upstream 280889 1361342 ~ 1366703 (-)
CI01000105_01513919_01516318 SPG21 coding upstream 430759 1513919 ~ 1516318 (-)
CI01000105_01579475_01580951 KBTBD13 coding upstream 496315 1579475 ~ 1580951 (-)
G316513 NA non-coding downstream 123319 955898 ~ 956082 (-)
G316512 NA non-coding downstream 125150 953849 ~ 954251 (-)
CI01000105_00436372_00441337 STARD5 non-coding downstream 637624 435687 ~ 441792 (-)
G316297 NA non-coding downstream 648730 429649 ~ 430671 (-)
G316295 NA non-coding downstream 654175 423917 ~ 425226 (-)
G316540 NA non-coding upstream 129386 1212546 ~ 1213357 (-)
G316555 NA non-coding upstream 178150 1261310 ~ 1282932 (-)
G316582 NA non-coding upstream 233624 1316784 ~ 1341559 (-)
G316583 NA non-coding upstream 234093 1317253 ~ 1341802 (-)
G316296 NA other downstream 693208 382583 ~ 386193 (-)
G316592 NA other upstream 252876 1336036 ~ 1394972 (-)
CI01000105_01638030_01639731 NA other upstream 554879 1637849 ~ 1639943 (-)
G316716 NA other upstream 569133 1652293 ~ 1652634 (-)
CI01000105_01891362_01892340 NA other upstream 799983 1883143 ~ 1893784 (-)
G317081 NA other upstream 950469 2033629 ~ 2094009 (-)

Expression


Co-expression Network