CI01000112_04055598_04089942


Basic Information

Item Value
gene id CI01000112_04055598_04089942
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 4055598 ~ 4090536 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000112_04055598_04089942.mRNA
ATGCAAGGCCAAGCAGCCCATTCAGATTTGTTTAGAAAACTGAAGCAGATCCATCTTGTTTCCTTTCAGTGCAGTCCTCATTCTACACCAGATGGGATTATCAATACATTCAAGCAATGTGCTCGTTTTCAGGAAGGCAAGAATCTAACAGAGTATGTCTCAGTGGTAGTGTTAGATGAGATAGGCTTGGCTGAAGATTCCCCGAAAATGCCTCTGAAAACTTTACATCCATTGCTGGAAGAGGGATGCATAGATGATCAGCCAGTACCCCACAAGAAGGTGGGATTCATCGGTATCTCGAACTGGGCTTTGGACCCAGCCAAGATGAACAGAGGGATATTTGTTTCACGTGGCGATCCTGATGAAAAGGAATTGATTGAGAGTGCAAAAGGAATATGTTCCTCAGATGCCATGATCCTTGAAAGAGTGAGAGATTACTTTCAGCCATTTGCCCGCGCTTACCTAAACATTTGTAAGAAACAGGGGAGAGGTTTCTTTGGTCTGCGAGACTATTACAGCTTGATAAAGATGATGTTTGCTGTTGCCAAAGCTGCTGACCAGAAGCCTAGTGGAGAACAGATTGTGAAGGCTGTGCTAAGGAACTTCAGTGGCAAGGATAATGTGGATGCTGTCAAAGTTTTCACGAGCAGACTAAATATCACACAGAAACTTGAGAATATCTGTGCCATTGAGCTTGTAAGAGAGAACATCACAGCCATTGGCCAAGATGAGGAATGCAGATACCTGCTTGTTCTGACCAAAAACTATGCAGCCCTTCGAATTCTACAGCAGACGTTTTTTTCAGACCAATGCCAGCCAGAGATTATCTTTGGTTCAAGCTTTCCAAAAGACCAGGAGTATACTCAGATATGCCGCAACATTAACCGTGTTAAGGTTTGTATGGAAACTGGTCAAACCATTGTGCTCCTGAACTTGCAGAACTTGTACGAAAGCTTGTATGATGCTCTCAACCAATATTACGTTAGCCTTGGAGGTCAGAAATATGTGGATTTGGGTCTTGGAACGCACAGAGTCAAATGCAGAGTGCACAAGGATTTCAGGCTCATTGTCATTGAGGAGAAGGACGTCGTGTACAAGCAGTTTCCTATTCCACTGATCAACAGATTGGAGAAACATTATCTTGACATCAATACTGTACTAAAGAGTGAGCAAAAGGACCTTGTTGAGAAGCTTGAACAATGGGTTCAATTCTTCATTTCTGCTAGAAGCAAGCACTCAATTGCTCCCCAAGCACGTCGTTATCGTCCAGCTGATGCTTTCATTGGCTACCACTCGGACACATGTGCGTCTGTTGTACTGCAAGTAACAGAGCAGCTCAAAGGGAAATTGGAGCTTTCAGATCCTAGAATCATAGATGAGGCTAAATTGATCCTTTTAAACTGTGCAACACCAGATGCCGTGGTTCGGCTAGACTGCACTTCCCTCTCCAGTGTAGAAAGTGATCACTTGTCAAGGGTATACTTTGAAGAGCAGAAGCATAGCTCCCTTGCTGACTTTATCCTTTCTCACACACAGCAAGCAGGGCCTAGCCATGCTATTTTCACAGAGGTGACTACCTTCTCAAGGCTTCTGACTGCAGCTGAAACTGAACCTCTACAGAACGTGGTCCAAAACGTAGAGCTCCTCTCTCTACAGCAGTTTGACACAGAACACTCATTCCTAAAGAAAATCAAGAATTATTTGGAAAACACCACCGGGGACAAGATACTTATCATCCAAACTGATTTTGATGAAGGCTCCCCAAATTTAAATGTCATTGCATCTGCGAAGTATTCTTCTATCAATGAGATCAACAAATTCAGGAAAGAGGGCTATGGAAAGATTTTTATGTACTTCATCACTAAACTACCAAGAATGGATGGTGGAACTTCTTACATTGGATTTCATGGCGCTATGGAGGTTGAGGAACTGTACGCAGAAGGAGGAGAAGAGAAGATGGAAGTAGAAGACAATACTGTGAGTCACAACCTCAACAACAGCATTGTATTTTCTGTACAGGACATTTGTGATACTATTGCCACCCTGTTGAGTTCAGGCTGGGAGAATGTTTTGGACACCACAGCACTGGTGCGTAGCTGCGTTCAGAGTGCAGTTGGCATGCTAAGAGATCAGACAGAGGCAGGCACCCGCAGCACCAAGAGAGTGCAAATTCTGCTCATGCTCTTGGCTGACAATGAGACTCTACAAGCTGAATTTCTGAAAACATTAAAGAAGCGAATTCATTCTCTATTGATGGCTCATGATGAAAACACAATCTCTGCCAAGAGCTGGGTCTCCAAGGAAGCACTAAATATCGATGCCTTGCAAGAGGGTGGAACTTTTAGACATGCCCTGTGGAGGCGAGTTCAAGCAGTAGTAACTCCCTTCTTGGCACAGCTTGTTTCAGTTATTGACCGTGACTGCAATCTAGACCTTTTACTGGACACAAACTCTGAAGAATCCTTGAAGAAACTGTGGTTGAATATTTTTGGAGATGTCAAGTTACTGAATGTTCCTTACACAAGTGTGAAAAACAACTCAGAGATGAAGACGATCTTGGTTCAGAACTATATTGCAGTTGACAGGAACATGGGTTGCATCATGCCTTTCAGCTGGAGAATTAAAGATTGTCTAGAGGACCTCTGGGTACATGCCTTGCAGCGAGAAGGACACACTCTAAAGCAATTTGAAGAGTTCTTTTGGAAGACCCCCTTGGGCAGGTATATGTCTGAAGCATCCCAAGAGATGCAAATGGAGTTTTTCCACAGGTATCTCCAGGATTTCGTCTCCATGACCATGAATGTGATATCGGAGGTTGATCTTGAGCTCTTATGTGGAGCCCTTACTTGTGGTGTAAATGAGCTTAGAGATGGGCAGGAAGCACAAGAGAGTGAAGTCATTTCTCTGCCGTGGGTTCATGCTGCCTACCATCATTTCAAGAACCGAATACAGAACCTCTACAGGATGATCAGTTTACAGCCTCAGATAGCTCAGATGCTCCAAGATAACAGATGTGCAAGAGAGGGCAATGAACTTGTGTTAGATGTGTATGCTGCTATGGCCTGTATTGAATACCTGGAGCCCCAGACTCTAGATGGAGATGTTCAAAGTCTGGCCTGGCTTAGACGTGTAAAAAAGCTACAGGTGCCAATTGAGCTGGTCTGCTGTGAGGAAAGCGTACGCCACTATAAAGAGAAAAGCAAACAGATGGTCACCCTCATCCAACATGGCTGGCGGCGCATTTACTCTCTGGCCTTGTTTGTGGAGCACATGCTGCTGGGTGTTGGAGATGTGCAATTGAAACTCAGGCCACTGGTTCTGGAACATACTCGACGCCTAGCAACAGTCCTAGAGAAGAACTCAGACCTCAAAAAGAAGCAGCCGTTTGAGGCAGTGATCACCGTACTCAAAGCCTGCAAAGATGAAGCATCTCAGAGCATTTTTAGGTTTGGCATTCAGCTTTGTCCAGTGTGCATGGGAGACCCTCGAGACCCTTTGAGTCTTCCCTGTGACCACATCTACTGCCTAATTTGCATCAAACAGTGGCTGGTGCCCGGTCAGATGCATTGCCCTCTGTGTGTACAGGAAGTGCCTGAAAACTTTGAGCTCAAGGCCTCTGAGGAAATACGGGATCTCATCAAACAAAATGCATTGTTCAGAATGCGATGTAATGCTTTCTTCATTGATCTGGTGTCCACCGTGTGCTTCAAAGACAACACTCCTCCCAGCAATGACATCATACTCCACCTGTTGTCCCTGCTGATGGTAGAGGCCTGTTCGCTCCCTCAAATCAGAGGGAAAGATCGGAGGTTCTTGACTAAGGCTCTTTCTCCCTTCGATGACTCTGTGGATAAAAATCCAGTGGTGCGTTCAGTGGTGCTGAAACTCCTACTCAAGTACAGCTTTGATGATGTGAAGCACTATCTTCAGCGGCATCTGACAGAAGTTGAGCAAAGTAACATCATAGAGGAGACTGATAAAACTGAACTATATTCCTTGTACATAAACTGTTTGGAGGACTCGATGTATGATCGGACACAGTGGCACTCTGTGGCGGAGCAGCAGGCCTGTTTGCAGGAGGAAACACGCTTTCTGCTGGAGTTCCTTCACTCTGATTCTGTATCTGCGCACGCTGCATCGATAGAGCACCTGCAGCAGGTGGCCAGAGTTCGACTGTGCCTGGATATGGCTGCTGATCTGCTAGTCAACAGAGTGATTAGTGCTGGTGTACACGATGATCCTTCGCCTTCTGGTCCAAGGTTTTTTAACAGTGTGGTTGATCTGTGCTGCCAGAGCAGAAATGACTGGTACAGGGTTTACCTCATCAGAAAGATCTGCAGTCTTCATGGGGTTGAATATGTCCAGAAACTTCTGCCACAGGAAGGGTTCAGGTGGCTATTTCCTCAGGAGATTCTTGAGTCGAATGAAGATGGCAGCCAGATTGACCAGTATCTGGCATGTGGAATGGACTACAAAACTATTAGAGATGCCGTAGCCAAAGCGATGCTAGATTGCAACATGAATGGAATACAGAAAGCCGTTGAGGATTGCAACTGCACACCCATGAAGAAAGCTGTTTATCTGCTAATGGCTTTGTTCAGAGAAGTCACCTCCTTGTACAGAATTGGAAACACCAACATGCACCCTAAACCTGAGCAATGTGCTGGCCTTGGAGATTTTATCAGAAGCTCGGACATCTTCGTCAATAATGAAATGAGGGTGTTTGCTGAAGCGCTGGTGAATAATCAACTGCATGCTCTGCGTGTACAACCTCAGACATCAGGCAGAGAGTTTGTACTGGTGGAGGTCACAGTGCATATGGCTGCAGTCCTGCTGTGTGGAAATTTGCCTTTACTGCAGCCACTGCAGCGGCTGGCACTGTCCACAAACAACATGATGGCTTCATTCATCCCAACTATGCCTGATGACATGTTGGCTGTTGCCCAGCAGGCCATGGGACAGCTTCAGTGGTATTTCTGTCCTAATGGTCATCCATGCACTGTTGGTGAGTGCGGTCGACCCATGGAAGTTGGTCGCTGTCCAGACTGTAATGCACAAATAGGTGGCCTCAACCACAACCCTGTTCAGGGTTTCCAAACCATGCAGATACAAGGGGACCGTACTAAGTTGGGACATATTCTGGGCGACGCACAACGTCGTGACCATCCTGACATGCAGGACACTAAGAATATGTCACCTGCCCCCTTCGCTCTTCTCAGACTGCTCACACACATGTCCTTGCTGCTGGGAGCTCAAAACAACCCACAGAGTGTCATGCAGATCATCAAGCCTGCTGTGCTGCATCCTGGTCCATTCCTGATGGCCCATCTTTTGAAGGACATGGAGCAGCTGAGCAGAGCTCTGGGCAAAGGGGTGGATGATACAGTCAATACCATCCATCTGACCATCCACAGTCTCCTGGAGCCCCATCAAACCAGCCAGTGGCCTGTTCTTTATGATCAGAACCTTTCCACTAAAGATGCAAGAAATGCATGGGAAAATGCCATGAATACTGATGTCATCACGCATCAGCTGAAGGTTTTGGAGCATAATCTAAAGGAAGTGAATGCCTTCATCAGGGAAGATGAGCGAGTGTCTTCTAATCCGGTGATGAAGTTGACATTTGGGGAACCAGGGCTTTTCCTGCGTTCTCTGCCAAGTAACTCCCTCATCCATAATTCATCCATCTGGAGCTGCAGGAAGAAGGTCTCAATGCTGAGTCTGACCCACATTGTAGAGCAGAACAATGGCCGGGACACTTTGCCTGTGCTCTGGAGGTTCCTTCAGAGGAGGGATTTGGTAAAGAAGTTCCAGAATGTGACAGACCTAACCTACAGCACCATAGGAGAGTTCCTGCACAGCCAGAAAGCAGATTCACTCTCTGCCTGGTATGAAAAGCGCATAAAAATCTTTTTGTCAACATGGAACCAAATCAGGGTATCTCTGGCTACCACAGGAGAGATAAAGCTGCCGGCTGAATACACTCAGGAAGATCTGGGTCTGGACGCTGACCTGCAGGTGCTGCTGCCGCAGAGACATGGTCTGGGCCTGTGCTCCACTGCCCTTGTCAGCTACCTCATCACCCTTCACAATGACCTTGTGTACGCTGTGGAAAAACACACCGGAGAGGAGTCTGGTTACACGGTAAGCCCAGCTGATCTGACAGAGCTGCACGTGATCCGTTATGAGTATGAGCGGGATCTGCTGCCGCTGGTGCTGTCCAACTGCCAGTACAGCATGGAACGTGGACAAGAAACACTGCTGGAGTACGATCTGCCCAAGATTCAGCAACAGATACTTACCCGCTTTCTGCAGGGCAAACCACATATCACTATTAATGGGATTCCGACACTGGTGAACAGACAGGACAGAAATTATGAGATCATATTAAAAGATGTGAAGGCCAAAGTTCAACAAGAGCCGTTGCAGCCTCTGACACAGCACGACCTGGTGAAGGAGCTGCAGTCCTACAGTGATGTGTGTGAGTCGTTGTCCACAGTCCAGCTGGCCCTGGGTTTCCTCGCCATGACAGGGGGAGAGCCACACATGCAGCTGAGCACCTATTTGAAAGAGGTGCTACAGATGACTGACCACATGGGCCCACACATCTACAAGGCATTGAGCAGGTGCAGTCTGAAACACTGTGTGGCGCTGTGGCAGCTGCTCAGCTCTTTTAAATCTGAGACAATGCTACGTCTGAAGAGGGACCCTTTTGTGGGAATCAGCGAAGAGTACAAACGTCCTCTGAAGGAGGAACACAAGAGACTGCTCACTAGTTTTTTCACGAAGTCTAGTGCTGATGCCTTTCTGTTGGAGATGCATGAGTTTTTGCTTTTGGTCCTAAAGAACCCAAAAGCCACGGACACCTTCAAGCCTGACTGGGGTCTGAAAGACACCGTTGTGTCCTACATGGAGCGTAAAGATCTGGACATTCCTCCTGAGGTGGACGAATTCTTCCCTAAAGAGATCCTGCTCTCGCAGTACACCAACACATGGAAGTTCTCTGTCCATGTCAGACAAGAAAGAAACCAAAGATGAAGTGCTTCTGTTGTCTTACCCAATCACTCTTATCAGGGAAAGCTTAGTTTTGATTTACAAATGCCATACTTTTTAGAACAATTGCTGATTACAGACTTTCAGAAACAGTGCCTTTTATGCACCTGAGTTACAGTGTGCAGTACTGCACAGTGAGGTACAGTATTCTGCTGCATATACAGCACTGTGTACTGTCATGGTACAATCTTTCAAATTAGTCTCTAAAATTTTAAGCCAATATATTACAACTTATTACAAAGTTTAAAACAATCATGAATCCATTGCTAAACTTTTGCTGTAACTTTTTTTTCTTCCAGTTTATTTGAAGTTGCTAACAATTGTATAACCATTCCTTTTTATTTGTTTACTTTAGAATACTATAGACTCATTTAAGAATGTAAAGTCGTTTGAAATATGCACCACATTATGAGCCCAGAACTGGACACACTTATGTCCATACAAACCTCATGTTGTTTTGCACTTTATTTTTTTTCTCTGCTAAAAACAATGTTTCTGTGTAGCAACACACCTGTATGCTGAAACAATGCTGTGTGCAAAAAATGTTTTTGTTGTTGTTTTTTTTCTCTGACTAACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000112_04055598_04089942.mRNA True 7632 mRNA 0.46 39 4055598 4090536

Neighbor

gene id symbol gene type direction distance location
CI01000112_04050993_04055507 NA coding upstream 91 4050993 ~ 4055507 (+)
CI01000112_04036511_04048219 NA coding upstream 7266 4036511 ~ 4048332 (+)
CI01000112_04033996_04035285 NA coding upstream 20261 4033893 ~ 4035337 (+)
CI01000112_04020422_04027554 NA coding upstream 27852 4020284 ~ 4027746 (+)
CI01000112_04004799_04012301 NA coding upstream 42918 4004575 ~ 4012680 (+)
CI01000112_04264297_04265684 NA coding downstream 173177 4263713 ~ 4265972 (+)
CI01000112_04346478_04353682 NA coding downstream 255167 4345703 ~ 4354299 (+)
CI01000112_04561557_04563086 NA coding downstream 470919 4561455 ~ 4563190 (+)
CI01000112_04579149_04582002 NA coding downstream 488613 4579149 ~ 4582164 (+)
CI01000112_04918167_04937803 NA coding downstream 827445 4917981 ~ 4938884 (+)
G329512 NA non-coding upstream 81715 3972116 ~ 3973883 (+)
G329513 NA non-coding upstream 129422 3859478 ~ 3926176 (+)
G329517 NA non-coding upstream 172654 3811534 ~ 3882944 (+)
G329413 NA non-coding upstream 512572 3533229 ~ 3543026 (+)
G329381 NA non-coding upstream 667147 3388250 ~ 3388451 (+)
G330383 NA non-coding downstream 13702 4104238 ~ 4104501 (+)
G330402 NA non-coding downstream 57983 4148519 ~ 4148864 (+)
G330404 NA non-coding downstream 59451 4149987 ~ 4150244 (+)
G330396 NA non-coding downstream 64863 4155399 ~ 4157165 (+)
G330433 NA non-coding downstream 104130 4194666 ~ 4194913 (+)
G329194 NA other upstream 1123709 2920254 ~ 2931889 (+)
G329125 NA other upstream 1437447 2617704 ~ 2618151 (+)
G328456 NA other upstream 2822480 1232022 ~ 1233118 (+)
CI01000112_05076817_05101845 NA other downstream 994184 5076817 ~ 5101845 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location