G330396


Basic Information

Item Value
gene id G330396
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 4155399 ~ 4157165 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU375561
TCAGATGAAGAAGGTAAGACAAAATCTCTAAAGAGAATCGTTATTATTAAAAAAAAGCCCTGTTTGTCTACTTCCAATTCATGATTTCTTGTTTACAGAAACTCAGATACAGAGAATAACAAACATCAGTCACACTGGAATGTGCACCTTGATTTGTGGAATAATAACAATCTTGTTTGCTACCCTTGGGAGATATCATTAGGAAGCATGGCGTTAGTTTTCACTGTTACGCTGATGATACTCAGCTCTATATTTCTTCGCGCCCTGACGNNNNNNNNNNNNNNNNGTCAACTAGATCATCCACTGTGAGGGCCTCATCGACACGACAGCCACGACACAGTTCCTCAACAACCGTCCATACCGGCGTGATCCTCAATACGATCCTCAATTCTCCTCAAATCTGAAATATCTGAAATAAATACTTTTAATGTTGCGATCCTATTGGACTTATGATAGCAACCTGAATTGTAACAAAGCACTGTTGGCCAGAGGAGAACTGGCACCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTTCTCCATTTTAACACCAATTTGCCACTTGTCTGCCACCTAATGTCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTCTGGCTTGCTTAGTTGGGGACACTTGACATTTGACTTGACATTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTAAGAGCTGCTGTGCAGCCAAACAATGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU375561 True 736 lncRNA 0.41 2 4155399 4157165

Neighbor

gene id symbol gene type direction distance location
CI01000112_04055598_04089942 NA coding upstream 64863 4055598 ~ 4090536 (+)
CI01000112_04050993_04055507 NA coding upstream 99892 4050993 ~ 4055507 (+)
CI01000112_04036511_04048219 NA coding upstream 107067 4036511 ~ 4048332 (+)
CI01000112_04033996_04035285 NA coding upstream 120062 4033893 ~ 4035337 (+)
CI01000112_04020422_04027554 NA coding upstream 127653 4020284 ~ 4027746 (+)
CI01000112_04264297_04265684 NA coding downstream 106548 4263713 ~ 4265972 (+)
CI01000112_04346478_04353682 NA coding downstream 188538 4345703 ~ 4354299 (+)
CI01000112_04561557_04563086 NA coding downstream 404290 4561455 ~ 4563190 (+)
CI01000112_04579149_04582002 NA coding downstream 421984 4579149 ~ 4582164 (+)
CI01000112_04918167_04937803 NA coding downstream 760816 4917981 ~ 4938884 (+)
G330404 NA non-coding upstream 5155 4149987 ~ 4150244 (+)
G330402 NA non-coding upstream 6535 4148519 ~ 4148864 (+)
G330383 NA non-coding upstream 50898 4104238 ~ 4104501 (+)
G329512 NA non-coding upstream 181516 3972116 ~ 3973883 (+)
G329513 NA non-coding upstream 229223 3859478 ~ 3926176 (+)
G330433 NA non-coding downstream 37501 4194666 ~ 4194913 (+)
G330450 NA non-coding downstream 63589 4220754 ~ 4221630 (+)
G330453 NA non-coding downstream 70607 4227772 ~ 4227997 (+)
G330454 NA non-coding downstream 71463 4228628 ~ 4228892 (+)
G330456 NA non-coding downstream 74616 4231781 ~ 4232006 (+)
G329194 NA other upstream 1223510 2920254 ~ 2931889 (+)
G329125 NA other upstream 1537248 2617704 ~ 2618151 (+)
G328456 NA other upstream 2922281 1232022 ~ 1233118 (+)
CI01000112_05076817_05101845 NA other downstream 927555 5076817 ~ 5101845 (+)

Expression


Co-expression Network