XLOC_001173 (BX323590.4)


Basic Information

Item Value
gene id XLOC_001173
gene name BX323590.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 19787281 ~ 19788211 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001869
GTGATTTTCCTCTTCTCGCTCCGGCAGGCTGATGATGATGCTGATGGCaatcttcttcctccggatcatggCAGGGTTGGAGCTGCAGCTCTCGTCAGACAGCGGGGCATGGGGCCATGCTGTAGACTGGTGGCCTGGCTGCGGAGCCACCGGCGCTGGTAGCTGCTGGCACAGCCACTGCTGAAGGAAGAGCCAGGTGAAGGCTGCGGGGTGGCCAGCAAACTGCTCAGAGATGCTACACAATGGAGAAGTGGAATTTGAttaactgtatatttacattataatacctctctttttcttttttcaatagctgtaatatataatatagagtGGTTTACATTGATTAATAGCAGTAATGACCATGGCTACAGATGTGACACCAAAATCAAATACTCTATTAAAACTGATCTGTGTCACACTATACTAAACCCAAACTTAATAAGCTGTATCCTTCTATCTCTCATTTGTGTGATAGATGCAAAGGCACAGTCGCAACCTATGGtcatacacttgaagtcagaattattagcccccctgaattattaaaccccctgtttatttttttccccaatttctgtttaacgcagagaagatttttttttcaacacatttctaaacataatggttttaataacccatttcaaataactggtttattttatctttgccatgataacagtaattaatatttgactagatatttttcaagacacttctatacagcttaatgtgacatttaaagccttaactaggttattaggttaactaggcaggatagggtaattaggcaagttattgtataatgatggtttgttctatagactatc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096580

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001869 True 827 lncRNA 0.40 2 19787281 19788211

Neighbor

gene id symbol gene type direction distance location
XLOC_001172 tma16 coding downstream 23243 19759370 ~ 19764038 (-)
XLOC_001171 NA coding downstream 86323 19689644 ~ 19700958 (-)
XLOC_001170 apela coding downstream 113381 19667947 ~ 19673900 (-)
XLOC_001169 polr1e coding downstream 139054 19637312 ~ 19648227 (-)
XLOC_001168 ecpas coding downstream 188039 19562752 ~ 19599242 (-)
XLOC_001174 grhprb coding upstream 47592 19835803 ~ 19845539 (-)
XLOC_001175 NA coding upstream 215443 20003654 ~ 20023739 (-)
XLOC_001176 mettl14 coding upstream 275291 20063502 ~ 20068155 (-)
XLOC_001177 ndst3 coding upstream 359011 20147222 ~ 20273227 (-)
XLOC_001178 NA coding upstream 671064 20459275 ~ 20553132 (-)
XLOC_001167 NA non-coding downstream 249098 19530752 ~ 19538183 (-)
XLOC_001166 NA non-coding downstream 282241 19503860 ~ 19505040 (-)
XLOC_001162 NA non-coding downstream 437386 19335193 ~ 19349895 (-)
XLOC_001161 NA non-coding downstream 512993 19252358 ~ 19274288 (-)
XLOC_001180 NA non-coding upstream 826998 20615209 ~ 20724351 (-)
XLOC_001184 CT583646.1 non-coding upstream 1141226 20929437 ~ 20930443 (-)
XLOC_001186 BX323083.1 non-coding upstream 1192764 20980975 ~ 20986124 (-)

Expression


Co-expression Network