XLOC_001175



Basic Information


Item Value
gene id XLOC_001175
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 20003654 ~ 20023739 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00002947
ACCTAACCCAACCTTGAGTTTCCAGttattgctgaggtgtgtgattctcTTGTTTCTCCACATGATCTACTTCAGTCTGTAAAACACAAAGGCAAGACTAACATAGCTCAACCATTTTGCTAAGCTCCAGCTCTTCAAGCATATCTCCAAAGCATATCGCCACCATTCCTCTTGTGAGTCTCGTTCTTCTGCCTGTTGTGTGTTCATTCATTACCtgaaaattaaacaactgtcACAAAGAAGACATCTATTTACCAATATATGCCCATTACCATTCCCTTTCTTTTAGAAAGACATCTATTTACCATCCAACCATCCACTCTACCAGGAAATGCCTGACCCAACCATGAATTTCCTGTCATTGTTGAGGTGGTTGAATCTCTTGTTTCTTCACATGCTCCACTccaatctgcaaaagacaaaacTAACATAGCCCTACCTCCGGCATTCTTCAAATAAATATCCAACGTTCCCCTTCTGAGTCTCCTTCTTCTGCCTGTTGTTTGTTCATTACCTGTAATGCAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00002947 True 525 lncRNA 0.41 2 20003654 20023739

Neighbor


gene id symbol gene type direction distance location
XLOC_001174 grhprb coding downstream 158115 19835803 ~ 19845539 (-)
XLOC_001173 BX323590.4 coding downstream 215443 19787281 ~ 19788211 (-)
XLOC_001172 tma16 coding downstream 239616 19759370 ~ 19764038 (-)
XLOC_001171 NA coding downstream 302696 19689644 ~ 19700958 (-)
XLOC_001170 apela coding downstream 329754 19667947 ~ 19673900 (-)
XLOC_001176 mettl14 coding upstream 39763 20063502 ~ 20068155 (-)
XLOC_001177 ndst3 coding upstream 123483 20147222 ~ 20273227 (-)
XLOC_001178 NA coding upstream 435536 20459275 ~ 20553132 (-)
XLOC_001179 ugt8 coding upstream 532328 20556067 ~ 20593778 (-)
XLOC_001180 NA coding upstream 591470 20615209 ~ 20724351 (-)
XLOC_001167 NA non-coding downstream 465471 19530752 ~ 19538183 (-)
XLOC_001166 NA non-coding downstream 498614 19503860 ~ 19505040 (-)
XLOC_001162 NA non-coding downstream 653759 19335193 ~ 19349895 (-)
XLOC_001184 CT583646.1 non-coding upstream 905698 20929437 ~ 20930443 (-)
XLOC_001186 BX323083.1 non-coding upstream 957236 20980975 ~ 20986124 (-)
XLOC_001187 BX323083.3 non-coding upstream 967138 20990877 ~ 20996026 (-)

Expression



Co-expression Network