CI01000189_04674916_04701633 (HHAT)


Basic Information

Item Value
gene id CI01000189_04674916_04701633
gene name HHAT
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 4674916 ~ 4701679 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_04674916_04701633.mRNA
GTTCAATTTTCATGACACCAAAATGGGAGCTGGTATCTCTACCTCGATGGGAGATGATGGCCTACTGGATTCTCTCCTTTGCCTCTCATCTCTATTCTTTCTACCAGCTGCACAGGTTTTCTAAAGAGCATGAGGTCAGTCTGGACAGAGAGGTGCAGCTGGAGAGAGGATTCTTTATTTGGGGATTCAAGAAGGACCCTACTGATTTTGAATGGAGTTTTTGGAATGAGTGGGCGTGGCGGTCTCTTCTGTGGTCTCTGATTGGACATGCTGTGGTGTCCAGACTGGCAGCCTATTATCTGCCTCAGTTCCGACTGGCAGTCTTTGCAGTGTATGGCTTGCTCTCCGCTGGATGGCTTCTCGGCGTGTGGGGCGTGACTCTTTTGATGCTACATCTAAGCATCTCATTGGTGGTTGCTCAGCTACGTAGCCCCGCCCTATCATGGTTTTGCTCCCTCCTGCTGCTCTCCACACTCAATGTCAGTGCCCTCCAGGATTTACAGCGTGGCTGGTGTACTTCTGAGGACCAGTACTACCTCTTGCTCTTCAGTACTGCTGTTTGTAGTTTGCGCTGCATTAGCTTTAGTCTGGAGCTGTGCTGGCACCCCCTGCAGGCCGGAGGACCAAACCACTGCTCCTCTCTGCAGGTTAAAAGACTAAAGACTCTAATTTCTCAGTTCTACAAGCTCACTGCTTACTGCTTCTATCATCCTCTGTTCTACAACGGACCAATCATGACCTACAGAGACTTCAGCGAACAGATGGAGAGACCGGTGTGTAAAGTGTCTGTGGTGTATGTGTTAAGTGGGATACTGCGCGTGTTTGTCTGGTGGTGTTTAGCCGAATTCATGATCCACTTCATGTACATGCACGCCATCCAGAGCAACGAAACGTACCTGGAGATGCTGCCGCACTGGGCGTTAGGTGGTTTGGCTCTGGCGTTAGTGCAGTTTTTTTACGTAAAGTATCTGGTCTTGTTTGGAGCGGTGTCTCTGCTTGTCAAGTTGGACGGACTGGAGCCGCCCACGTTACCACGGTGTGTCAGCATCATGTACAGCTTCACTGGGATGTGGAGACACTTTGACGTGGGGCTTTACAAATGGCTCATCAGATACATATATGTGCCGTTGGGCGGCTCACATCATGGTGTGTTCTGGAAGATTGTCTCCACGGCGCTGGCGTTTGGGTTTGTGTGTTTCTGGCATGGTTGCCATGACTATCTGCTGTACTGGGCCCTGCTGAACTGGATCGGGATCTTGGTGGAGAACGTTTTCGCACTCCTCTTCTCTTCTCATCCTCTTCATCACGCTATTGTGAGTTCACACAAACCCAATCTTAAGTATCAGCTTTAAATAAAGTTCAGTGTTTTAATGAAATAAGTTGTTATAAGGTTACTCA

Function

symbol description
hhat Predicted to enable palmitoyltransferase activity. Predicted to be involved in protein palmitoylation. Predicted to act upstream of or within smoothened signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in chondrodysplasia-pseudohermaphroditism syndrome. Orthologous to human HHAT (hedgehog acyltransferase).

NR:

description
Hhat protein

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_04674916_04701633.mRNA True 1398 mRNA 0.49 9 4674916 4701679

Neighbor

gene id symbol gene type direction distance location
CI01000189_04576234_04577598 NA coding upstream 96881 4576156 ~ 4578035 (+)
CI01000189_04170533_04184962 CCSER2A coding upstream 489643 4170533 ~ 4185273 (+)
CI01000189_04103153_04114542 FAM149B1 coding upstream 559579 4103153 ~ 4115337 (+)
CI01000189_04099205_04099517 MRPL57 coding upstream 575192 4099205 ~ 4099724 (+)
CI01000189_04049709_04050966 NA coding upstream 623217 4049709 ~ 4051699 (+)
G381808 NA non-coding upstream 1544 4668128 ~ 4673372 (+)
G381792 NA non-coding upstream 47968 4626722 ~ 4626948 (+)
G381786 NA non-coding upstream 78199 4596476 ~ 4596717 (+)
G381705 NA non-coding upstream 96251 4578499 ~ 4578665 (+)
G381655 NA other upstream 552572 4120387 ~ 4122344 (+)
G381491 NA other upstream 1048061 3625736 ~ 3626855 (+)
G381120 NA other upstream 1833791 2839221 ~ 2841125 (+)
CI01000189_00987665_01058757 PACRG other upstream 3615531 987525 ~ 1059385 (+)
G379799 NA other upstream 3662013 1012546 ~ 1012903 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012137 hhat coding NC_007128.7 CM002901.2 25777330 ~ 25831569 (-)