G379695


Basic Information

Item Value
gene id G379695
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 795189 ~ 795509 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU434075
GAACTAACCCTTTAACGTGGAGGTAAACAAGCACAGTTACCGCTGCTTAAGTCGGATAGATTAACATATAATTATCCGGCGGATCTAGTCAGGCCAGTCAGCAGATTCAGCTTATTGTCAAGCTCTTTTTCATTTTCTAAAATGAGCAGCTGACTCATGTGTGGAACATACCAGAGCTGAGGTGTGAAACCAACATATTTACAATAACCCACTTAAAGCAAGTATGTATAGCTCACACCAAAATGAGAATTGTCATCATTTATTCACTATCAACTTGTGCCAAAACTGTATGACTTCCTGTTTTGTGGAACACAAAAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU434075 True 321 lncRNA 0.38 1 795189 795509

Neighbor

gene id symbol gene type direction distance location
CI01000189_00693840_00694391 TRNP1 coding upstream 99222 693701 ~ 695967 (+)
CI01000189_00671005_00685458 RPS6KA1, RPS6KA2 coding upstream 108918 671005 ~ 686271 (+)
CI01000189_00613239_00646678 NA coding upstream 148241 611599 ~ 646948 (+)
CI01000189_00552262_00553370 NA coding upstream 241703 550833 ~ 553486 (+)
CI01000189_00537167_00546397 NA coding upstream 247882 537167 ~ 547307 (+)
CI01000189_00877464_00886363 VGLL2B coding downstream 81955 877464 ~ 886915 (+)
CI01000189_00893376_00898271 CTSL.1 coding downstream 97867 893376 ~ 898402 (+)
CI01000189_00968023_00981490 PACRG coding downstream 172514 968023 ~ 981814 (+)
CI01000189_00987665_01058757 PACRG coding downstream 192016 987525 ~ 1059385 (+)
CI01000189_01068817_01136608 QKI, QKIA coding downstream 273308 1068817 ~ 1136608 (+)
G379570 NA non-coding upstream 31086 760546 ~ 764103 (+)
G379582 NA non-coding upstream 177711 616592 ~ 617478 (+)
G379627 NA non-coding upstream 215870 578385 ~ 579319 (+)
G379599 NA non-coding upstream 321165 473810 ~ 474024 (+)
G379592 NA non-coding upstream 334758 459307 ~ 460431 (+)
G379700 NA non-coding downstream 46878 842387 ~ 852067 (+)
G379780 NA non-coding downstream 179556 975065 ~ 976610 (+)
G379786 NA non-coding downstream 199340 994849 ~ 995109 (+)
G379660 NA non-coding downstream 301076 1096585 ~ 1107177 (+)
G379825 NA non-coding downstream 421267 1216776 ~ 1217132 (+)
G379600 NA other upstream 298281 475615 ~ 496908 (+)
G379799 NA other downstream 217037 1012546 ~ 1012903 (+)
G381120 NA other downstream 2043712 2839221 ~ 2841125 (+)
G381491 NA other downstream 2830227 3625736 ~ 3626855 (+)
G381655 NA other downstream 3324878 4120387 ~ 4122344 (+)

Expression


Co-expression Network