XLOC_012437 (si:ch1073-469d17.2)


Basic Information

Item Value
gene id XLOC_012437
gene name si:ch1073-469d17.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 51201217 ~ 51202339 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024396
AGTGATTACTCGGGACACTGCAGACACCAAGGACACTGCCACTCTGATATCTGCAACCCAAACCTACACCTTCTACCCAGCAAGCATGTCGAAGGAGAAGCTGGACGGTCTGGTGAAGCGCATGGAGTTGACCCTGGCGGAGATGGAGCAACTGAAGCTGCACTGCGGCCGGCAGAGCGAGGAGCTGAGCCAGCTGGTGGTGGAGCTCCGCAGAGAGAACCAGGAGCTGGCCGAGAAGTACAACCAGCTGGCGCAGGACATGAAGGAGGCCAAGGAGATCATCGAGCAGCTGCAGGACACCAAGTACGCTTTCGACGCGAAGGAGCGGCAGGCCCAGAAGCTCAGCCGGCAACTCTGAAAACACCGGGAGTGGACTGGCGACTTTAACGTTCACTGAACGCATGCGACACAACATTGGAAGAGACAAAGACTACTTACAGAAGACTGAAAAATTGAACGCAATCTTACAACAATTCGtacctttttaatttagtggctaatttgtgttAGTTCGTACAAACCCATTTGTACAGTTTAGGATGAGTTCCGCATCCATCAGTaaagggtagggttaggggtggctTTGTGAACGCTCCTCTTTTTAACAATTGCACGTTTTTATACAAATTgaattgtacgaatttgtacaaattggccacttttctgacaatggGTAAAATCGTTACGTTTGCTCATGAGATCGGACTGGAAAAATTACATGGCAATGAAAGAGTATTTGAAACAATGACGCACTGTGTTTTTGTGGAAACAGAAACTAATTAAAATGCCAATGCTGATGTAAATTTTCTTGTACTTGGAAATTCGTAACTTTCATCTAGCAGCTAATTTGTAATCTCATTCGAACACTAGTATAATTTCCTCATCCCCCAATGAGGGAGGGGTGGGGTTTGGAGGCACGCTTCCTTTTAACAATTTCCTGTTTTTATACGAATTgaattgtacgaatttgtacgaattaaccACTTTCGGACTGTAGGTAAAATAGTAACGCTTCCTTGTGAAATCGGGCTGGAAAAATGACAACAATGGAAATGTGTTTGAACCAATTACACTGATTCTGTGGGAACAGAGAACCTAATTAAAATGTCAAcgctaatgttat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101485

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024396 True 1123 mRNA 0.45 1 51201217 51202339

Neighbor

gene id symbol gene type direction distance location
XLOC_012436 paplna coding downstream 1659 51138092 ~ 51199558 (-)
XLOC_012435 aqr coding downstream 79692 51020114 ~ 51121525 (-)
XLOC_012434 NA coding downstream 182396 51015111 ~ 51018821 (-)
XLOC_012433 NA coding downstream 196222 50999852 ~ 51004995 (-)
XLOC_012432 NA coding downstream 216527 50975783 ~ 50984690 (-)
XLOC_012438 psen1 coding upstream 3886 51206225 ~ 51224800 (-)
XLOC_012439 trappc12 coding upstream 28871 51231210 ~ 51262430 (-)
XLOC_012440 NA coding upstream 373727 51576066 ~ 51618363 (-)
XLOC_012441 ccr6b coding upstream 440348 51642687 ~ 51651631 (-)
XLOC_012442 atp6v1c2 coding upstream 452890 51655229 ~ 51679784 (-)
XLOC_012419 NA non-coding downstream 1137780 50052171 ~ 50063437 (-)
XLOC_012410 CU929037.3 non-coding downstream 1606480 49587635 ~ 49594737 (-)
XLOC_012443 NA non-coding upstream 586373 51788712 ~ 51790824 (-)
XLOC_012447 NA non-coding upstream 856670 52059009 ~ 52091999 (-)
XLOC_012448 NA non-coding upstream 917235 52119574 ~ 52121058 (-)
XLOC_012449 NA non-coding upstream 1262259 52464598 ~ 52487693 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000316_01303047_01303319 NA coding CI01000316 null 1302164 ~ 1303670 (-)