CI01000300_09282621_09306536


Basic Information

Item Value
gene id CI01000300_09282621_09306536
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 9281908 ~ 9306766 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_09282621_09306536.mRNA
ATATAAATGGAACATTTCTGATACATTTTACTTTGACTCTTTCTATAAATTCTTTGAAAACCTCTAAAGATCAAGTTAATTGCTAAAGGGTCAATGACATGTACATTTTTGTCCAGATCTATTAATTTACATTAAAAAATGCAATGCATACATACGATGACTTGAGCACACCCAATATTATCCAATTGCAGAGCCACACTGTCAGGAAACACCAGAATTGGAGACAGAGATAAGGTTAAACCCAAACAGGGTATTTATTAACAGTGATGAATTTAACAGCAAACAGGTGAGCAATGGAACAGTCAGAATAATGATGAGCAGATTAATATGAATTAGTCTATTTTCCCTTTACCTGTCACGATCACAATCTCAGTTCAGCATTTCCCATCATCTTCTGTTTACCACCTGCACACACTCCCCAATCAAGTACCTGTATACTTGCCTGTAGAGATTTACCGGTTATGATCCCGTCCATTGTCATCATCCGTCTTCTGCCATCACCCGTCTCCTTCAGCTAGCCTGCACCAGTCGGCATCTGCAAAAGAGAGACTGTGTTAAATCAAGCTAAGTTTTATCATCTTTTCATGAACTCTGTTCCTTACCTGCTTTACTTGCTTGTGTCCTGCAAATCCTGCAAATAAAGAATCTGTTATTTAATATTACCTTTCCTGTCTTTTTCTATGTGCATGACAGAAGATCAGACCAAGTAAAGGATGGACTCAGGGAGTGATTTAGCAGAAGAGATTCTGTGCTCCATCTACCAGAACGGCCGTAAAATGGAATTATATGTGGAGGAATTCTTGGAATATTGCCACTTAACATCTTGGGATGACAGGAGCCTCAATGATTTGTTCTGGAGTGGATTGGACAGTCATCTAGCACCTTTGATACCATTAGGCAGTCCAACCCTCTCTTTGAAGCAGTATCTTGATTATGTACTGTTGCTAAATGGCTCGTCCTTCACTGTTGAACTTGGGGAAACAGCAGTGATGTTTGTGTTGAAAGCAGTGGTGCTCTGTGCATTGCTCGGCGGGGCTGGGGCTCAGTCGTGCCCGTCTCAGTGCTCCTGCAGCGGGACAGCGGTGGACTGCCACGGGCAGAGTCTGCGGAGCGTGCCGCGGAACATTCCCCGCAACGCTGAGCGACTTGACCTGAATGCAAACAATCTGACTAAAATCACTAAAGCAGATTTTGCGGGACTGAGGCACCTCAGAGTTCTGCGTCTCAACAGGAATAATCTTCAGGTTCTTCCGGAGTTGCTGTTTCTGGGCACGACTAAACTCTTCAGACTACTCAAGCTGGCGCGAACATACTGTTGGTGCGAATACCCGCTCATAGTTGCTACGGTTACTGTTGTCATGTCATGTAGCCATCATCCCTCATCCAGTAACCATTAGTGCCGTTTCACACTGTGCAAACTTTCTGAGTGTGTTTGTGGGTGTTTCTGACCACCGAAGGAATTTCTCCTGTTGTGACGTCTGTGTGTGGCTTTTATTGAGCCTGTCACTGGTTATTAAGTCAAATCAAATGACTTACAATGGTAATTGTCTGTGTTAGTTGTTTGTGCATACATTTAAATCAGATATTGATCATGTGTGGATGAATGTTCTGTGTGTGGATGAAGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_09282621_09306536.mRNA True 1627 mRNA 0.43 5 9281908 9306766

Neighbor

gene id symbol gene type direction distance location
CI01000300_09136541_09152739 NCAPG coding upstream 128748 9136541 ~ 9153160 (+)
CI01000300_09080472_09093223 NA coding upstream 188590 9079792 ~ 9093318 (+)
CI01000300_09050912_09060586 CHRNA9 coding upstream 220723 9050912 ~ 9061185 (+)
CI01000300_09025773_09045147 RHOH, N4BP2 coding upstream 236246 9024449 ~ 9045662 (+)
CI01000300_08979290_08987162 UBE2KB, UBE2K, UBE2KA, UBE2K.S coding upstream 293130 8978233 ~ 8988778 (+)
CI01000300_09322462_09376575 SLIT2 coding downstream 15450 9322216 ~ 9377627 (+)
CI01000300_09389521_09391739 NA coding downstream 82755 9389521 ~ 9392353 (+)
CI01000300_09486849_09487928 MAB21L2.S, MB211, MAB21L1, MAB21L2, MAB21L1.L, MAB21L2.L coding downstream 179015 9485781 ~ 9488024 (+)
CI01000300_09541949_09542458 NA coding downstream 234724 9541490 ~ 9542749 (+)
CI01000300_09658054_09661559 RS3A, RPS3A.S, RPS3A, RPS3A1, RPS3A.L coding downstream 351288 9658054 ~ 9661711 (+)
G413856 NA non-coding upstream 23984 9257630 ~ 9257924 (+)
G413851 NA non-coding upstream 37817 9243884 ~ 9244091 (+)
G413591 NA non-coding upstream 91606 9189827 ~ 9190302 (+)
G413577 NA non-coding upstream 103202 9163926 ~ 9178706 (+)
G413469 NA non-coding upstream 186127 9095075 ~ 9095781 (+)
G413892 NA non-coding downstream 72495 9379261 ~ 9379478 (+)
G413893 NA non-coding downstream 73152 9379918 ~ 9380171 (+)
G413894 NA non-coding downstream 73528 9380294 ~ 9380739 (+)
G413895 NA non-coding downstream 77321 9384087 ~ 9384291 (+)
G413896 NA non-coding downstream 79127 9385893 ~ 9386276 (+)
G413459 NA other upstream 333305 8857687 ~ 8948603 (+)
G411777 NA other upstream 2812203 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 3389483 5891021 ~ 5892824 (+)
G410388 NA other upstream 5085353 4195646 ~ 4196555 (+)
G410382 NA other upstream 5157492 4123698 ~ 4124416 (+)
G414249 NA other downstream 1063145 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 1293170 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 1339425 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 2396718 11704476 ~ 11708351 (+)

Expression


Co-expression Network