CI01000300_09389521_09391739


Basic Information

Item Value
gene id CI01000300_09389521_09391739
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 9389521 ~ 9392353 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_09389521_09391739.mRNA
ATGGAGAAGCACAAGAAAACTGTGAAAAAGTCATATTGCGATAAACTCACCAAAGATGCCAGGGACCGTTATTTGGAGAAATTGTCATCCATTCATAACATAGATCTGTACGAGCTGACTGCAGTAAGTTGGAGTGCTGACCCCGCATTGCTACCTAAATCATCATACTTAAATATTTTAAACTATCCTGTTTATGGTATAAGCGCATATACTAGTGAACAATTTAAAAACTATAAATCCTTCAAAGCCCACGGACATTTCACTAATGACTGGGTGCAGGATTTATTTACATTCCGAACGAAGGACTGCGACAACACAGTAGTAACAGCAGAGATCACCATCTCCTCCAGCCTCCTGCATCTTCTCAGTGTGAAGCCGATCACTTTCTCCAGCCTGATGGACCATTAGTGTCAGCTGACTGCACTGTTTTTCCTTACTTAGTGTCTGTGTGTGCATCTCAATCAGCTCTGAGCTCTTGAATCGGTATATTGTGTACACAAATTTTGCGACTGACACAGTCCTGATCAGTGCCCTAGCTACTGGAGCCTGTACCACGAAGCCGGATTCACTGGCTAGCCAGGTAAGTTTCAGATTAGTTTGCACCAATCCTGGGTTTTAGGTACCATGAAAGTGACTTGGCTTTTATTGGTGTTCATCGCCATAGTAACTTACGCTCCACAGCTAACCTGCTCCGGGGCAGGTTATGTTCTGGATAAGAGATCTCAAACCGAAATTGGACCATTTAATGTGAGCAAAGTGATACTGACACATCCAACGCAATAAAGTCACGCCCCTGTTTCACTTCCTCCAAATTAAAGGTCACTATATAGTAAAAACAAATATTTAAAGATGAAATTGTCTGGCTTTAATGATAATTAGAATTATTTTATGATTTATATAATTATTATATGATCTATATTATTAATCCATTACACACAAGCAATTTTAGTTTAACAGTTAAGCATTTAGTTTAAATGAATATTAATATATACAGATCATATGTAATATAAATAAGCTGTAGA
>TU475384
ATTAGTTTGCACCAATCCTGGGTTTTAGGTACCATGAAAGTGACTTGGCTTTTATTGGTGTTCATCGCCATAGTAACTTACGCTCCACAGCTAACCTGCTCCGGGGCAGGTTATGTTCTGGATAAGAGATCTCAAACCGAAATTGGACCATTTAATGTGAGCAAAGTGATACTGACACATCCAACGCAATAAAGTCACGCCCCTGTTT

Function

NR:

description
hypothetical protein cypCar_00014813

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_09389521_09391739.mRNA False 1022 mRNA 0.38 2 9389521 9392353
TU475384 True 208 lncRNA 0.44 1 9391923 9392130

Neighbor

gene id symbol gene type direction distance location
CI01000300_09322462_09376575 SLIT2 coding upstream 11894 9322216 ~ 9377627 (+)
CI01000300_09282621_09306536 NA coding upstream 82755 9281908 ~ 9306766 (+)
CI01000300_09136541_09152739 NCAPG coding upstream 236361 9136541 ~ 9153160 (+)
CI01000300_09080472_09093223 NA coding upstream 296203 9079792 ~ 9093318 (+)
CI01000300_09050912_09060586 CHRNA9 coding upstream 328336 9050912 ~ 9061185 (+)
CI01000300_09486849_09487928 MAB21L2.S, MB211, MAB21L1, MAB21L2, MAB21L1.L, MAB21L2.L coding downstream 93428 9485781 ~ 9488024 (+)
CI01000300_09541949_09542458 NA coding downstream 149137 9541490 ~ 9542749 (+)
CI01000300_09658054_09661559 RS3A, RPS3A.S, RPS3A, RPS3A1, RPS3A.L coding downstream 265701 9658054 ~ 9661711 (+)
CI01000300_09725667_09740001 FAM160A1, FAM160A1A coding downstream 331917 9724270 ~ 9742037 (+)
CI01000300_09765979_09766870 DCTPP1 coding downstream 373626 9765979 ~ 9767154 (+)
G413898 NA non-coding upstream 64 9389245 ~ 9389457 (+)
G413897 NA non-coding upstream 941 9388128 ~ 9388580 (+)
G413896 NA non-coding upstream 3245 9385893 ~ 9386276 (+)
G413895 NA non-coding upstream 5230 9384087 ~ 9384291 (+)
G413894 NA non-coding upstream 8782 9380294 ~ 9380739 (+)
G413901 NA non-coding downstream 58 9392411 ~ 9392621 (+)
G413902 NA non-coding downstream 648 9393001 ~ 9393862 (+)
G413903 NA non-coding downstream 1714 9394067 ~ 9394295 (+)
G413904 NA non-coding downstream 2297 9394650 ~ 9394907 (+)
G414089 NA non-coding downstream 299322 9691675 ~ 9692431 (+)
G413459 NA other upstream 440918 8857687 ~ 8948603 (+)
G411777 NA other upstream 2919816 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 3497096 5891021 ~ 5892824 (+)
G410388 NA other upstream 5192966 4195646 ~ 4196555 (+)
G410382 NA other upstream 5265105 4123698 ~ 4124416 (+)
G414249 NA other downstream 977558 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 1207583 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 1253838 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 2311131 11704476 ~ 11708351 (+)
G413899 NA non-coding upstream 410 9391202 ~ 9391513 (+)

Expression


Co-expression Network