CI01000304_04914520_04932141 (KIAA1958, E130308A19RIK, RGD1310951)


Basic Information

Item Value
gene id CI01000304_04914520_04932141
gene name KIAA1958, E130308A19RIK, RGD1310951
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 4914520 ~ 4932141 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_04914520_04932141.mRNA
CCCAAGGGGAGGAGGCTCAACATGGAGGACTGCTTACACACTTCCTCCGACAACCTCGCTAAACTGGTGAAATGGGCCCACAGTCATGGAACAATCTGCACCTTGATCCCCAACCTAAAACACATGCTCAATGAGGGCTCTCACGGCACCCTTACAGCCCTGTGGGGCTGCAGCGCCGGTCACGCCTACCACTGGCCACTCAATACCACCTGCAAAACGGGAAACAAGGAACGGATGTGCTACCAAGAAAGCCGAAGCATCAACACGGACAGTATGATTCAGGCAGCTGCCGTCATGCAAAACACCTCAGCAGAGCGCTTCCTCGGCAGTGCCGGAAAAAACAAGGGCGATTCCAGCCAAGGAGATTCCAGTCAGATTCACGACTCTTGTGACATTTCCAACTGCAGCGAACCTTCTGAGATGGACGATAATGGCGAGGAGTACAATAACAACCTGTACGACATCGTCTGCGAGTCGTCGGCCACCGACGAAGACGGCGACTCTGATTTCAACCAAACCTCTAACGTCACACACAGGAAAAGAGCCGGCAAAGGACCAGGACCTGAGGACAGCACTGACCCGGCGTTGAAGAAAATCAAACAAGAGAGGGGTGAAGACTATTACAGTGTGGCCAACCCACAGATACCTGGCAGCTCGGAGGGAAACCGCTCTACTGGAGGCATTACACAGTCGCCCAAGTCAAACCTTCACAACAGACCGTCATCTAGGTCTTCGATGTCCCAGAAGCCTTCCTCTGTAGACGGCGATTCCATGGCGGTGTCCTCGTCACCGTTGGACAACTCTCCTACATCCATGATCAAACCCTTGCGCGCGCCTTTCCATGTTACTCAGAACAAAATGCACATGAACTCAAACCCAGCATGCAGTCAAAGTTTGGCAGCCTTACCTCATTCTGGAAGGATTGACGCTATGGGGGTGCTACACCGGGACGAATATCCCAGATCTTCTTTGTCTTACGGAGAGGCTTCAATTGGTGTAAACCCTGAAATGGATCTTCTAGCAACGCAGGCACTTAGTACAGAAGTTAGAGCAGACAACACAGAGCATCTAGTTCCTGCTGCACACAGTTCAGAAGAGCAGTTCTGCCCATCAGATCTCAGTCCAAACAGTGAGAGGTATTTTGAAGAGAGAAAACACCTGGAAGAGTTTATAACAAGCATAGATACTATAACCCTACAAAACCTGCAGACAGTCATTGATCGGATCCTCGTCTTTCACGAGCGAACGCAGATGCCGCTGTCCAGTCCGGCCAGACTGGGAGAGCAGGAGCTGTTTCCAGGAAGCGGACTCTATCTGCCACACTACAAACTGGCATCCATGCTGCAGGAGTCACGGCAGGACAGCATGAGACTCTTCCACCTGCTGTTCGAGCACTTCTTCAGCGAGGAGGATCTTAACGGGGCGGTCGCTTTTGGGAAGAGGGGAAAAGTACCTGACGGCAAAAAGATCCTGGACAGAAGAAGAGTGGATGGGATTATGTCATATGTTCTGCGTTGTTCTACGATTGACGGATGGACACCTGTGGAATCATCTAAGCTGAAGAAGGCTTGTATTAATAAATGCAGGCTTCGAATCGGTCAGAAAAAGAAGCAAGAATCTTCTCAAGAGTCCTTTATTTTTTACATGGATGAGCGAGCATACCGAGAACAGAACGAGAAGACCATTCGCAGCACCCAGACAGCTCTTCGCAACTTCCGGGACTTCCTGGTTTCTAAGTATCCAACTGAGACCAGAGAGATTTACTGCATCCCCTGCCAAGAGCTAGACATCTACCTGGCCTCCTTCTTTGTGGATGCTCGCCAAAGGGATGGCTCAGAGTATGAGCCCAACAGCCTGGCCAACTATCAGTGTGGCCTGGAACGCTATCTGAAGGAGCATCGCTATTCCTACAGCATTACAAGAGACCGGGAGTTCCAGAGATCCCAAGATGCCCTCAAGCAAAAACAGTTAGAGCTCAAGTTCAAAGGGAAAGGCAACAAACCCCACAAGTCAATGAAGCTGACCCTTGCTGACGAGTTGCTCTTAAGGAAACGGGGGCTCCTGAGTCGCTTCAACCCTGAGGGTCTACTCAACTTGGTGTGGCTCAACAACACCAAGGCTTTTGGCCACTGTACAGGCTTCCATAGCTCCACACTCAAATGGGGCGATGTGCGCTTAATCACCACAGAAACGGGACTAGAGTGTCTGGAGTGGACCTACCAGGATTTTAGTGACCCTAATGCCAGAAACAGAAGGTCCACGACTGAGTGCCGCATCTACGCTACTCCGCATGCTCCTCAAACATGCCCGGTGCAGGACTACAAGGACTTCGCTCAACGCAGACCTCAAGCAATGCTCTTTGAAGATGCCCCCTTTTATCTGTCAATCAAGCCTGTGGTCAACCTGGCCGCCCTGCACTGGTACAACTGCCAAGCTCTGGGAAAGAACAAATTAGCTAAGATGGTGAAGACCATGTGTGAGAAAGGCAACATTCCAGGGAGAAAGACCAATTTCAGTGTTTACCAGAGTTGCAGCACCTTGTCCGAGGCCCAGAGCAATCAGTTAGTCCTGATCTGCAATGACCTTAGGCAACAAGCCGTCCAGTCAGGGAGTTCCCATCCTGGCAGCACCAACTTTGTCATAGCTGGTTCTTTTGACTCTACTGACTCTGCT

Function

symbol description
rgd1310951 Orthologous to human KIAA1958 (KIAA1958).
e130308a19rik Is expressed in neural retina. Orthologous to human KIAA1958 (KIAA1958).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_04914520_04932141.mRNA True 2673 mRNA 0.51 5 4914520 4932141

Neighbor

gene id symbol gene type direction distance location
CI01000304_04894865_04896532 CSN4, COPS4 coding downstream 17815 4894865 ~ 4896705 (-)
CI01000304_04809176_04857217 CWC27 coding downstream 57303 4809176 ~ 4857217 (-)
CI01000304_04789939_04792844 NA coding downstream 121676 4789439 ~ 4792844 (-)
CI01000304_04661808_04672936 PPWD1 coding downstream 241584 4661766 ~ 4672947 (-)
CI01000304_04579087_04595306 TJP2, TJP2A coding downstream 318180 4578438 ~ 4596340 (-)
CI01000304_04935603_04968053 HSDL2 coding upstream 3361 4935502 ~ 4968302 (-)
CI01000304_05039292_05067803 UGCG coding upstream 106845 5038986 ~ 5067814 (-)
CI01000304_05098315_05108511 CDC37L1 coding upstream 165496 5097637 ~ 5108511 (-)
CI01000304_05139300_05146419 NA coding upstream 206982 5139123 ~ 5146728 (-)
CI01000304_05194636_05197677 NA coding upstream 262487 5194628 ~ 5197867 (-)
G421884 NA non-coding downstream 5581 4908430 ~ 4908939 (-)
G421875 NA non-coding downstream 28747 4885574 ~ 4885773 (-)
G421860 NA non-coding downstream 134025 4780181 ~ 4780495 (-)
G421601 NA non-coding downstream 244454 4669654 ~ 4670066 (-)
G421795 NA non-coding downstream 264855 4649365 ~ 4649665 (-)
G421890 NA non-coding upstream 11650 4943791 ~ 4944002 (-)
G421891 NA non-coding upstream 11990 4944131 ~ 4944346 (-)
G421905 NA non-coding upstream 96896 5029037 ~ 5029363 (-)
G421906 NA non-coding upstream 97269 5029410 ~ 5029694 (-)
G421907 NA non-coding upstream 98073 5030214 ~ 5030946 (-)
CI01000304_04263955_04264962 NA other downstream 649319 4263846 ~ 4265201 (-)
G419354 NA other downstream 2648279 2262502 ~ 2266241 (-)
G419353 NA other downstream 2678414 2229384 ~ 2236106 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 1545310 6480743 ~ 6483986 (-)
G422354 NA other upstream 1698945 6631086 ~ 6631499 (-)
G422378 NA other upstream 1812538 6744679 ~ 6783046 (-)
G422810 NA other upstream 2698018 7630159 ~ 7652703 (-)
G423386 NA other upstream 3930082 8862223 ~ 8865296 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location