Gene
RNA
| Item | Value |
|---|---|
| gene id | G421601 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 4669654 ~ 4670066 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484200 | True | 413 | lncRNA | 0.31 | 1 | 4669654 | 4670066 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_04579087_04595306 | TJP2, TJP2A | coding | downstream | 73314 | 4578438 ~ 4596340 (-) |
| CI01000304_04536971_04554186 | MAMDC2B | coding | downstream | 115468 | 4536971 ~ 4554186 (-) |
| CI01000304_04522897_04527887 | SMC5 | coding | downstream | 141767 | 4522849 ~ 4527887 (-) |
| CI01000304_04517750_04518058 | NA | coding | downstream | 151596 | 4517594 ~ 4518058 (-) |
| CI01000304_04458463_04459040 | NA | coding | downstream | 210420 | 4457613 ~ 4459234 (-) |
| CI01000304_04789939_04792844 | NA | coding | upstream | 119373 | 4789439 ~ 4792844 (-) |
| CI01000304_04809176_04857217 | CWC27 | coding | upstream | 139110 | 4809176 ~ 4857217 (-) |
| CI01000304_04894865_04896532 | CSN4, COPS4 | coding | upstream | 224799 | 4894865 ~ 4896705 (-) |
| CI01000304_04914520_04932141 | KIAA1958, E130308A19RIK, RGD1310951 | coding | upstream | 244454 | 4914520 ~ 4932141 (-) |
| CI01000304_04935603_04968053 | HSDL2 | coding | upstream | 265436 | 4935502 ~ 4968302 (-) |
| G421795 | NA | non-coding | downstream | 19989 | 4649365 ~ 4649665 (-) |
| G421794 | NA | non-coding | downstream | 20689 | 4648552 ~ 4648965 (-) |
| G421787 | NA | non-coding | downstream | 35707 | 4633717 ~ 4633947 (-) |
| G421785 | NA | non-coding | downstream | 37007 | 4632189 ~ 4632647 (-) |
| G421783 | NA | non-coding | downstream | 44109 | 4625312 ~ 4625545 (-) |
| G421860 | NA | non-coding | upstream | 110115 | 4780181 ~ 4780495 (-) |
| G421875 | NA | non-coding | upstream | 215508 | 4885574 ~ 4885773 (-) |
| G421884 | NA | non-coding | upstream | 238364 | 4908430 ~ 4908939 (-) |
| G421890 | NA | non-coding | upstream | 273725 | 4943791 ~ 4944002 (-) |
| G421891 | NA | non-coding | upstream | 274065 | 4944131 ~ 4944346 (-) |
| CI01000304_04263955_04264962 | NA | other | downstream | 404453 | 4263846 ~ 4265201 (-) |
| G419354 | NA | other | downstream | 2403413 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 2433548 | 2229384 ~ 2236106 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 1807385 | 6480743 ~ 6483986 (-) |
| G422354 | NA | other | upstream | 1961020 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 2074613 | 6744679 ~ 6783046 (-) |
| G422810 | NA | other | upstream | 2960093 | 7630159 ~ 7652703 (-) |
| G423386 | NA | other | upstream | 4192157 | 8862223 ~ 8865296 (-) |
