XLOC_012581



Basic Information


Item Value
gene id XLOC_012581
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 6934024 ~ 6936237 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00027042
TGCCACACAGTATTCGCAgtttagtgtttgtttgtgtaccaGGCAAGCACAGCTCCTGCAGGGGTCACTGGGGTCAGGAAATCTCTCTCCATTTCCACAGTCCCGACCGTTGAACTGACAGCCTTCACACACAGGACAGCACTGGTCCGGGCGAGTAGTGGGGTAAGTACATCCGGGGTTGTGACACGGCTTCGTATTGCAGGTCACATGACCATTGGAACATATGCAATGAGCGCAGTGATCAGAGGGGTCGGCGAACTCCTGACC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00027042 True 267 lncRNA 0.54 2 6934024 6936237

Neighbor


gene id symbol gene type direction distance location
XLOC_012580 dnaja2b coding upstream 64668 6857071 ~ 6869356 (+)
XLOC_012579 NA coding upstream 148322 6780490 ~ 6785702 (+)
XLOC_012578 NA coding upstream 176578 6750054 ~ 6757446 (+)
XLOC_012577 lmf2a coding upstream 206110 6706140 ~ 6727914 (+)
XLOC_012576 c2cd5 coding upstream 230380 6638726 ~ 6703644 (+)
XLOC_012582 CU467655.1 coding downstream 49639 6985876 ~ 6994125 (+)
XLOC_012583 CU467655.2 coding downstream 63957 7000194 ~ 7012242 (+)
XLOC_012584 si:dkey-88e18.2 coding downstream 136893 7073130 ~ 7088382 (+)
XLOC_012585 vwf coding downstream 213907 7150144 ~ 7228004 (+)
XLOC_012586 CABZ01015105.1 coding downstream 328724 7264961 ~ 7269671 (+)
XLOC_012573 CU928088.1 non-coding upstream 409134 6524776 ~ 6524890 (+)
XLOC_012570 BX321877.1 non-coding upstream 628359 6300608 ~ 6305665 (+)
XLOC_012563 NA non-coding upstream 1094190 5837098 ~ 5839834 (+)
XLOC_012592 NA non-coding downstream 502010 7438247 ~ 7440305 (+)
XLOC_012593 NA non-coding downstream 513011 7449248 ~ 7478152 (+)
XLOC_012597 CR318588.3 non-coding downstream 633092 7569329 ~ 7587421 (+)

Expression



Co-expression Network