XLOC_012573 (CU928088.1)


Basic Information

Item Value
gene id XLOC_012573
gene name CU928088.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 6524776 ~ 6524890 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025165
CTCGGCAgccagctctctgcaactctcatatGGTCGCCCAGTAAAGCTAAGCaaggctgtgcctggtcagtatctggatgggagactacatgggaaagctaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111241

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025165 True 115 rRNA 0.53 1 6524776 6524890

Neighbor

gene id symbol gene type direction distance location
XLOC_012572 wash1 coding upstream 25524 6479963 ~ 6499252 (+)
XLOC_012571 ptprq coding upstream 118167 6319447 ~ 6406609 (+)
XLOC_012570 BX321877.1 coding upstream 219111 6300608 ~ 6305665 (+)
XLOC_012569 otogl coding upstream 259243 6155258 ~ 6265533 (+)
XLOC_012568 si:ch1073-390k14.1 coding upstream 381584 6126506 ~ 6143192 (+)
XLOC_012574 fkbp4 coding downstream 11403 6536293 ~ 6550378 (+)
XLOC_012575 b4galnt3b coding downstream 33256 6558146 ~ 6619842 (+)
XLOC_012576 c2cd5 coding downstream 113836 6638726 ~ 6703644 (+)
XLOC_012577 lmf2a coding downstream 181250 6706140 ~ 6727914 (+)
XLOC_012578 NA coding downstream 225164 6750054 ~ 6757446 (+)
XLOC_012563 NA non-coding upstream 684942 5837098 ~ 5839834 (+)
XLOC_012561 NA non-coding upstream 847410 5672914 ~ 5677366 (+)
XLOC_012560 NA non-coding upstream 857160 5658327 ~ 5667616 (+)
XLOC_012558 NA non-coding upstream 923100 5601144 ~ 5601676 (+)
XLOC_012579 NA non-coding downstream 255600 6780490 ~ 6785702 (+)
XLOC_012581 NA non-coding downstream 409134 6934024 ~ 6936237 (+)
XLOC_012582 CU467655.1 non-coding downstream 460986 6985876 ~ 6994125 (+)
XLOC_012583 CU467655.2 non-coding downstream 475304 7000194 ~ 7012242 (+)

Expression


Co-expression Network