XLOC_012582 (CU467655.1)


Basic Information

Item Value
gene id XLOC_012582
gene name CU467655.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 6985876 ~ 6994125 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025178
TCGGacgcaaaacacacacaaactctgtgGTCTGGCTGTCTTTTACACTCCCGCATCCGATGAAAGAGCACTGCCAAAGCTAATAATGTAGATTTGGAGAGAAAACCTGGATCATATACAGTTAGATGGGACTGTGAGAGATGGTTTTGAGGTTGATCTTCAGGAAACAGCCATTGTGGAGGATTTTAATATTCTGTCACCTTTATTCTGCGGTCAGCCGGAATTCTGTAAttgcagCCAGTGAATGTGAGGGTGGTCATGACGTGTTTGCCAAAGTCAAAGAGAACAGCCTGATGGGAACATTTATTGCCAACCTCAGTTTTACAGCAGATCCATCAGCCCATCGCATGCATTTAAGGCTTTCTGGAAAAGACGCTGGCTGGTTTTATTTGGAGGGGAAAACCATCA
>TCONS_00025179
AGATTTGGAGAGAAAACCTGGATCATATACAGTTAGATGGGACTGTGAGAGATGGTTTTGAGGTTGATCTTCAGGAAACAGCCATTGTGGAGGATTTTAATATTCTGTCACCTTTATTCTGCGGTCAGCCGGAATTCTGTAAttgCCAGTGAATGTGAGGGTGGTCATGACGTGTTTGCCAAAGTCAAAGAGAACAGCCTGATGGGAACATTTATTGCCAACCTCAGTTTTACAGCAGATCCATCAGCCCATCGCATGCATTTAAGGCTTTCTGGAAAAGACGCTGGCTGGTTTTATTTGGAGGGGAAAACCATCAGACTGAATTCAACATCAACTAGGATTATTGACAGAGAGGTAACTATAACTCATGCTAACATACTGTCATCTTTTCCCTTGATATTGAATACGTTATTACAATCATCTGTGGGAATTGCAGAAACACGGCTCAGTTTTAAAGGCGACTGTAAGGTGTTATGAACATAAAGTGCTACAGGTATGTTCAATCATATGTGAGACTTAACTGTACGATTTACATTTGTCAATTAAAAGTAATGTTGTTGTCAGGCTGAACTCAGAATCATGGTGGAGGTTCTGgatgaaaatgacaacaaaccaGAGTTCCTACAAAGCTCCACACAACCAGTGCAGCTCAGCGAGTTGACAGCAGTGAACTCTGTAGTGTTTACAGTCCAGGCCACAGATGCTGATGGAGACACACTCACATACATCATTGAAGAATCATCAGTAGCCTGATGCCAGATATTTTCGAGTGGACTTGCCCAACAGCGGCAAAGTGATTCTCAACAAGTCACTGGACTATGAGATCAAAACGCAGCTCCGACTCACTCTTTATGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095956

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025178 False 408 processed_transcript 0.45 3 6985876 6993004
TCONS_00025179 True 856 processed_transcript 0.42 5 6985965 6994125

Neighbor

gene id symbol gene type direction distance location
XLOC_012581 NA coding upstream 49639 6934024 ~ 6936237 (+)
XLOC_012580 dnaja2b coding upstream 116520 6857071 ~ 6869356 (+)
XLOC_012579 NA coding upstream 200174 6780490 ~ 6785702 (+)
XLOC_012578 NA coding upstream 228430 6750054 ~ 6757446 (+)
XLOC_012577 lmf2a coding upstream 257962 6706140 ~ 6727914 (+)
XLOC_012583 CU467655.2 coding downstream 6069 7000194 ~ 7012242 (+)
XLOC_012584 si:dkey-88e18.2 coding downstream 79005 7073130 ~ 7088382 (+)
XLOC_012585 vwf coding downstream 156019 7150144 ~ 7228004 (+)
XLOC_012586 CABZ01015105.1 coding downstream 270836 7264961 ~ 7269671 (+)
XLOC_012587 ano2a coding downstream 289158 7283283 ~ 7304547 (+)
XLOC_012573 CU928088.1 non-coding upstream 460986 6524776 ~ 6524890 (+)
XLOC_012570 BX321877.1 non-coding upstream 680211 6300608 ~ 6305665 (+)
XLOC_012592 NA non-coding downstream 444122 7438247 ~ 7440305 (+)
XLOC_012593 NA non-coding downstream 455123 7449248 ~ 7478152 (+)
XLOC_012597 CR318588.3 non-coding downstream 575204 7569329 ~ 7587421 (+)
XLOC_012598 NA non-coding downstream 581723 7575848 ~ 7581195 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_11634008_11643242 NA coding CI01000013 null 11633342 ~ 11643242 (-)