CI01000013_11634008_11643242


Basic Information

Item Value
gene id CI01000013_11634008_11643242
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11633342 ~ 11643242 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_11634008_11643242.mRNA
TGAGAAATGTTTTTGAGGTTGATCTTCAGTCAACAGCCACTGTGGAAGATTCTAATATTCTGCTACCTTTACTCTGTGCCAGTGAATGTGATGGTGGGCATGATGTGTTTGCCACAGTCAAAGAGAACAGCCTGATGGGAACATTTATTGCCAACCTCAGTTTCACTACACACCCATCAGCTAATCACATGCACTTGAAGCTTTCTGGAAAAGATGCTGGTTGGTTTTATCTGGAGGGAAGAACCGTTAGAGTGAACTCAACGTCAACTAGGATTATTGACCGTGAGGCTGAACACAGGATCATGGTGGAGGTTCTGAACGAGAATGACAACAAACCCGAGTTCCTACAAAGCTCCATACAACCACTGCATCTCAGTGAGTTGACAGCGGTGAACTCTGTAGCGTTTACAGTCCAGGCCACAGATGCTGATGGAGACGCACTCACATACATCATTGATGAAAAATCACCTGATGCCAGGTATTTTCGAGTGGACTTGCATAACAGTGGCAAAGTGATTCTCAACAAATCATTGGACTACGAGATCAAAACTCAGCTCCGACTGACTATTTATGCAGTGGAAACTAACACAAATGAGCACTACAACACAACAGCAACAGTAATCATCAATGTGACAGATGGGGATGACCAATACCCACAATTCCAGCCTTGCACTCTTCTCTCAGCCAATCACAGCAACCGCATATGTGCCAACCCACTGTACACCGCCAACATCACAGAGAACGAGCAGGCAGCTCAGACGGATGACCCTCTGAAGTATGCAGTAGCCACGGTTCTGGTGAGGGTTCTTGCAGAAAACAGGTTTCCGCCCCAGTTCAACCGTTCAGCGTACCGTGGCTTTGTTAGTGATAGCACAAGTCCTGCCTCGCTTGTTGTGACGTATGGCAACAAATTACTTATCCTGGAGGCCACTGATCAAGACTTCACCGACGTACGTGACTCAACAAGATCACAACACTACAAGACCACATACAATTCTTACAACCACACAGCAGTAACATCCCAGTGTCAACATTCAATTTCAACATCACAAAGGCCCTGGTTTGACATTCATTGCATGAAATATGGATTTATGTTCCTGTTTAAGACTAAGAAACTGAGTTTGTTTTATGTTTTTGGGTTAAAGGGTTTCAATCCCAGACTGCAGTATTCTCTAAACTCTCAACACAACAGCTCTCGGCTCTTTTACATTACACAAGAGGGACTGCTCATTGCCAAAACCAACCAACTACACCCCAGCCAAAAATACTTCCTAGAGGTTTTAGCCACTGACCTTGAATCAGGAGACATTGTTAAAGCTGCATTGCATGTGGAAGTTCTTCAGAAAGGCCAGCCAGGGCATCTGTATAGCAGTGAGACAGTGGCCAGGGCAGAGGGCGTGGCAGGGGTGTGTCTGATCCTGCTGGCCATTGCCTTATTTACACTGATGCGCTGCATACGGATGAGCAGAGAGAAGCGGGATCATGCCATCCGGAACAATGTGGCTGACAGTACACACCCTAATGTGGTAAGAAAAAATCTATTTGTGCAACTTGCACAACATGGACAAAGGACATGTTAAACTTTGCATATGTGTGGAAAATGTCCATTTGTTCCAAACGTATTTGTTCCAAACGTCCCAGACACCTATGAATAAGTTTATACTCTACTAAGCCCATTTCAATGTCTGTTCGAGTCGACCGACGTCTCGGCCTGTTTGAGCACTATCACCTGGTAATAAGATCTTTAGTGCTCCACTAAACATTATCACTTGAGTATAGAAGTAAGATTCTCTAGTGTCTAGTCTGCAGTGCTGCTCAATAACCAGAGACTCCAGTTGTTGTCCTTAATTGTTTTTAATCAAATCATGACTGGGAGAGTTCTCATCAATCTCTCCCTATTCAAAAGAATACAGCAGGTTATATAGGATTTCGGGTACATCTCACAGTCAGTATAACATGATCTATTACTCATAATCATCAGTCTTAATATGATTGGTTCAGATTTAAGAAAAACAACATAGTTCCTCTGGCATGCTTACTGGCGGAGTAAATTTAGATTAGAACAACTGAATCACAGAATCATCATCGGGTTAATAGTTTTTACCATTTTTATAGGCTTTTTTTTATCTCTAGAAGGATGCTGTCTAGCTAGCACAGCAAAATGTTTCCACTTGTTACAACACACAGTCCTAGTGACTATTTCTCTATTTCAAAGTTAGCTTGTTAGGCCTGTAGGAGAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_11634008_11643242.mRNA True 2246 mRNA 0.43 9 11633342 11643242

Neighbor

gene id symbol gene type direction distance location
CI01000013_11596784_11604320 NA coding downstream 28477 11596688 ~ 11604865 (-)
CI01000013_11566351_11566887 NA coding downstream 66455 11566125 ~ 11566887 (-)
CI01000013_11516609_11563528 VWF coding downstream 69814 11516291 ~ 11563528 (-)
CI01000013_11480488_11512738 NA coding downstream 120604 11480488 ~ 11512738 (-)
CI01000013_11468322_11475130 CERS3B coding downstream 158212 11468161 ~ 11475130 (-)
CI01000013_11776137_11791017 LMF2A coding upstream 132632 11775874 ~ 11791017 (-)
CI01000013_11794495_11842660 C2CD5 coding upstream 150840 11794082 ~ 11842675 (-)
CI01000013_11860175_11889068 NA coding upstream 216660 11859902 ~ 11890116 (-)
CI01000013_11893589_11902743 FKBP4 coding upstream 250048 11893290 ~ 11902743 (-)
CI01000013_11920663_11935058 NA coding upstream 276882 11920124 ~ 11935058 (-)
G85632 NA non-coding downstream 38041 11593301 ~ 11595301 (-)
G85620 NA non-coding downstream 67836 11565132 ~ 11565506 (-)
G85585 NA non-coding downstream 197189 11435862 ~ 11436153 (-)
G85570 NA non-coding downstream 212051 11417265 ~ 11421291 (-)
G85569 NA non-coding downstream 217992 11413643 ~ 11415350 (-)
G85661 NA non-coding upstream 37941 11681183 ~ 11683033 (-)
G85676 NA non-coding upstream 62883 11706125 ~ 11706464 (-)
G85454 NA non-coding upstream 127507 11770749 ~ 11775434 (-)
G85481 NA non-coding upstream 205025 11848267 ~ 11851199 (-)
G85712 NA non-coding upstream 304128 11947370 ~ 11954012 (-)
G85401 NA other downstream 597876 11035032 ~ 11035466 (-)
G85188 NA other downstream 1038005 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 1060902 10563459 ~ 10569290 (-)
G85170 NA other downstream 1152642 10479861 ~ 10480700 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012582 CU467655.1 non-coding NC_007129.7 CM002902.2 6985876 ~ 6994125 (+)