CI01000013_11893589_11902743 (FKBP4)


Basic Information

Item Value
gene id CI01000013_11893589_11902743
gene name FKBP4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11893290 ~ 11902743 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_11893589_11902743.mRNA
ATGACTGCAGAAGAGGTAGTGGCTGAAGGTTGCAGCATCCCCGTCGAGGGTGAAGACATCACCCCGAAGAAAGATGGAGGTGTTTTAAAGATGGTCAAGAAGGAGGGTACAGGCTCTGAGTTGCCTATGACCGGTGATAAAGTATTTGTGCACTATGTCGGAACACTGCTTGATGGCACACAGTTTGACTCCAGCCGGGATCGAGGGGAGAAGTTCTCCTTTGAGCTGGGCAAAGGTCAGGTGATCAAAGCATGGGACATCGGTGTGGCCACGATGAAGATTGGCGAGATCTGCCAATTGATTTGCAAACCCGAGTATGCTTATGGAGCTGCTGGCAGCCCACCCAAAATCCCACCCAACGCTACCCTTGTGTTCCAGGTGGAGTTGTTTGAGTTTCATGGGGAGGACATCACCGATGAAGAAGATGGTGGAATTATTCGCAGGATTATCACTAAGGGGGAGGGCTACACAAAGCCTAATGAGGGTGCATCTGTGGAAGTGTGTTTGGTGGGCCGTCACGAGGAGCGTGTTTTCGACGAGCGTGAGTTGAAGTTTGAGGTGGGAGATGGAGAGAGTTTGGGCCTGCCTCCAGGCGTGGAGAAAGCCTTGCAATCCATGGAGCAGGGAGAGGAGGCATTCTTCACCATCAAACCAAAGTATGGCTATGGAACTGCTGGCAGTGACAAATTCAACATTCCACCTAATGCTACACTGCAGTACAATATCACACTGAAAGCATTTGAGAAGGCCAAAGAATCCTGGGAGATGAACTCGAGTGAGAAACTAGAACAGAGTGTCATCGTCAAAGAGAAAGGAACTCAGTATTTTAAGGAGGGGAAATACAAGCAGGCAGCTGTGCAGTACAAACGCATTGTGTCCTGGTTAGAGCACGAGTCCAGTATGGAGCCGGAGGAAGAAGAGAAAGCCAAAGCGCTGCGATTGGCTGCTCATCTCAACCTAGCTATGTGCTACCTAAAGCTGCAGGAAGCAAGCTCTGCCCTCGAGAACTGTGACAAGGCACTGGAGCTGGACGCAAATAATGAGAAGGCTTTGTTTAGGCGAGGAGAGGCGCTGGTTGTCATGAAGGAGTTTGACAGGGCGAGAGCAGACTTCCAGCGTGTCACTCAGTTGTATCCAGCAAATAAGGCAGCAAAGAGCCAGATCATGCTCTGCCAGAAACATATCAAAGAGCAACATGAGAAGGACAAACGCCTCTATGCCAACATGTTCCAGAAGTTTGCAGAGAGAGACGCCAAAAAGGAGGCGGAGCATGAAAAGGAGCAGGAAAAGAAACAGAATGGTAATGCAATGGAAATAGATGAAAACGGAGCTCAGGAACAAACTGCAGCATAATGGTGTGCGTTTCTGTTTACTGTCTTTTGTGTTTGGTTTTGTTTTTTTAAGAGGTTTTTTTTTTTATATACCTTCTATAATTTCTGTTCCCCTGAAGTGTGTTTGTGCGAGTGAGGATGATGCGTACATGCTTTGGTTTCTAATATAAAGTAGCGAGACATTTGCTTTTGTACTGTGGCCAGACCCTTATGGCCAGGGTGTGTATGAATGTTTGTGTGTGCATTACTGTAAGGCAGCTAGTCGGCCTGGCCATGTTCTCTGCTGCGTCTCTCTTCACATTGAGAAACGTTGGAAATAAA

Function

symbol description
fkbp4 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Orthologous to human FKBP4 (FKBP prolyl isomerase 4).

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process

KEGG:

id description
K09571 FKBP4_5; FK506-binding protein 4/5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_11893589_11902743.mRNA True 1652 mRNA 0.48 10 11893290 11902743

Neighbor

gene id symbol gene type direction distance location
CI01000013_11860175_11889068 NA coding downstream 3174 11859902 ~ 11890116 (-)
CI01000013_11794495_11842660 C2CD5 coding downstream 50615 11794082 ~ 11842675 (-)
CI01000013_11776137_11791017 LMF2A coding downstream 102273 11775874 ~ 11791017 (-)
CI01000013_11634008_11643242 NA coding downstream 250048 11633342 ~ 11643242 (-)
CI01000013_11596784_11604320 NA coding downstream 288425 11596688 ~ 11604865 (-)
CI01000013_11920663_11935058 NA coding upstream 17381 11920124 ~ 11935058 (-)
CI01000013_11970695_12013511 NA coding upstream 67807 11970550 ~ 12013511 (-)
CI01000013_12040713_12093531 OTOGL coding upstream 137945 12040688 ~ 12093531 (-)
CI01000013_12104212_12115389 NA coding upstream 200948 12103691 ~ 12115604 (-)
CI01000013_12125008_12129746 NA coding upstream 221780 12124523 ~ 12130312 (-)
G85481 NA non-coding downstream 42091 11848267 ~ 11851199 (-)
G85454 NA non-coding downstream 117856 11770749 ~ 11775434 (-)
G85676 NA non-coding downstream 186826 11706125 ~ 11706464 (-)
G85661 NA non-coding downstream 210257 11681183 ~ 11683033 (-)
G85632 NA non-coding downstream 297989 11593301 ~ 11595301 (-)
G85712 NA non-coding upstream 44627 11947370 ~ 11954012 (-)
G85715 NA non-coding upstream 51328 11954071 ~ 11955117 (-)
G85718 NA non-coding upstream 58695 11961438 ~ 11966326 (-)
G85769 NA non-coding upstream 213626 12116369 ~ 12116730 (-)
G85776 NA non-coding upstream 220748 12123491 ~ 12123821 (-)
G85401 NA other downstream 857824 11035032 ~ 11035466 (-)
G85188 NA other downstream 1297953 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 1320850 10563459 ~ 10569290 (-)
G85170 NA other downstream 1412590 10479861 ~ 10480700 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012574 fkbp4 coding NC_007129.7 CM002902.2 6536293 ~ 6550378 (+)