CI01000013_10564288_10569141


Basic Information

Item Value
gene id CI01000013_10564288_10569141
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10563459 ~ 10569290 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_10564288_10569141.mRNA
AAGTATAGGACAGAGGGTTTCTTCACCATGGCCTGAATTGGGTCTGTCGGAATTCAAGACATCCAAAATGTGCAGTGTCAGAGGAGCAGGGCTGAGAAACAGACTGTTTTAATTGATTCAGACAAATGCAATAATTCAGGCAATACAGCATGTCGTTCATCCAGAAGATTAGATTTTTCCTTAAGCGGCAGATTTCTAGAGTTCAGGTGTCTTTGAGTGCATTTCTGTGGCGGGAGCAGTCATATGATTCACCTGCTGTCATGCTTTCCAGAGTGGTCCCAGTGGCTGGGGTCACTGCACACAAGATCAGTAAACAGATTACTTTCTTCGCCAATAACGTCGCTGGGACTCCTACAGCTAGCTTTTCACCTGGTCACCCTAAACCTATATTGCTGTTACTGCCTTGGCTAGGCTCCAGACCACAAGCCATTGCAAAATACTGTGAGATTTACTTTCGCACGGGCTTCGATGTACTCGTAGTGGAAAGTGAGGTGAGCCAGTTCTTGTGGCCCCGCTGGGGGTTGGAGTATGGTGGGCATTTACTGGAATTATTAGAAAGCGAGCGCTTCTCACAGCGCCCACTACTGGTCCATGCTTTCTCCATAGGGGGATATACATTTTCTCAGGTGCTTGTACATGTGGCCAAAGACACCCAGCGTTACCAAGGCCTGACAAACAGAATCAGGGGTCACATCTACGACAGCCTGGTCATGGGATCACTGGAGCATATGGCCACCGGCCTAGGTAAAACCATGTTTCCCCGGATGGAAGGTCTCGTGAGAACGGCTAGCCTTCTGTACTTCCGTGTCTTTAAACATCAGACAGTTGACTACTTTAACTCAGCGATCAACATTTTCTGGAACACTCCTGTGAAGGCACCTGCTCTCTTCTTTTTCTCTGAGAATGATGCACTGTGCGATTACAAGAGCTTGGAGAAGATGGTGGAGTTCTGGAGGAAGCGAGGCCTATCTGTCGAGAGTAAGAAGTGGAAGGAATCTCTTCATGCAGGTCATCTGCGCACCCACACTCAGGAATACCTGTCCACCCTGGAGAACTTCGTGCTGTCCCTCAACATGGTGCCTCTAAAGGCCAAAATGTGAACTGTGAATGTCCATCACCTGTCTCATTAAACATCAGAAATTGCCTGAAGTGCCTACTTTTGACTGTTATATAGACATTCTCATGGTCTTGGTTCTAGTCGAATTGCTTCTGTCTTGCAAAAATTGACTGTTTCTCAAACATTTTTAGTCTGTCAAAATATTTATGAGACTACATTAAATGAAGACCATAGCATTAGCGTGTTGAAGATGTGTAATACTACATACAAGCTGTTGATATGTGACCAGTTTGGTTTATAGCACTACAGACTCCTGCACTTCGGACCTCAAAATGACTATCTTTACACTGTATATCATTATTTTGTTGTAGATGTTTATGATCAACAACAGTAAAAGATTTAGGAAACCTTTTGTACGTATTGAGTCATAGCTTATATGACAACATGACTCAACTTTTAACATCTATCTATAGTATGTTCATTTGAATACACTGACTGTCAATCTTGTATCATTGATCTGTTTGCTTCAAAAGGTAACAGCCCTGATTGCTCTTTCAGTTTTCTTTGACTGTTTTCAAAAGAAATGGCCTAGTTATTTACATTTGTCAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_10564288_10569141.mRNA False 1670 mRNA 0.43 3 10563718 10569290

Neighbor

gene id symbol gene type direction distance location
CI01000013_10560692_10562065 NA coding downstream 1438 10560297 ~ 10562280 (-)
CI01000013_10540473_10556642 NA coding downstream 7030 10540415 ~ 10556688 (-)
CI01000013_10338616_10372320 SEMA3D coding downstream 188562 10338538 ~ 10375156 (-)
CI01000013_10218387_10244139 SEMA3A, SEMA3AB coding downstream 319579 10218370 ~ 10244139 (-)
CI01000013_10127318_10157548 SEMA3E coding downstream 406170 10127196 ~ 10157548 (-)
CI01000013_10597504_10610862 IMPDH1B, IMPDH1, IMPDH1A coding upstream 28214 10597504 ~ 10610862 (-)
CI01000013_10799938_10806858 PRPF18 coding upstream 229308 10798598 ~ 10806858 (-)
CI01000013_10828622_10836409 CPT1, CPT1B coding upstream 259241 10828531 ~ 10837146 (-)
CI01000013_10838711_10841053 NA coding upstream 269207 10838497 ~ 10841564 (-)
CI01000013_10843295_10852581 CHKB coding upstream 273870 10843160 ~ 10852581 (-)
G85190 NA non-coding downstream 12448 10550928 ~ 10551270 (-)
G85186 NA non-coding downstream 29531 10527386 ~ 10534187 (-)
G85174 NA non-coding downstream 73509 10489814 ~ 10490209 (-)
G85173 NA non-coding downstream 74361 10488834 ~ 10489357 (-)
G85172 NA non-coding downstream 76095 10487359 ~ 10487623 (-)
G85196 NA non-coding upstream 17081 10586371 ~ 10587130 (-)
G85201 NA non-coding upstream 52240 10621530 ~ 10684563 (-)
G85262 NA non-coding upstream 187522 10756812 ~ 10760487 (-)
G85311 NA non-coding upstream 204490 10773780 ~ 10776213 (-)
G85343 NA non-coding upstream 331197 10900487 ~ 10900711 (-)
G85170 NA other downstream 83018 10479861 ~ 10480700 (-)
CI01000013_09309438_09335834 MICAL3A other downstream 1240874 9307036 ~ 9336077 (-)
CI01000013_07339918_07367774 NA other downstream 3181358 7339709 ~ 7367774 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 4679346 5882049 ~ 5884071 (-)
G81547 NA other downstream 4819680 5739526 ~ 5744038 (-)
G85188 NA other upstream 22914 10592204 ~ 10595337 (-)
G85401 NA other upstream 465742 11035032 ~ 11035466 (-)
CI01000013_11596784_11604320 NA other upstream 1029770 11596688 ~ 11604865 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location