Gene
RNA
| Item | Value |
|---|---|
| gene id | G85173 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 10488834 ~ 10489357 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU96933 | True | 524 | lncRNA | 0.42 | 1 | 10488834 | 10489357 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_10338616_10372320 | SEMA3D | coding | downstream | 113678 | 10338538 ~ 10375156 (-) |
| CI01000013_10218387_10244139 | SEMA3A, SEMA3AB | coding | downstream | 244695 | 10218370 ~ 10244139 (-) |
| CI01000013_10127318_10157548 | SEMA3E | coding | downstream | 331286 | 10127196 ~ 10157548 (-) |
| CI01000013_10037048_10083444 | PCLOB | coding | downstream | 405390 | 10037048 ~ 10083444 (-) |
| CI01000013_10014588_10020597 | NA | coding | downstream | 468237 | 10014385 ~ 10020597 (-) |
| CI01000013_10540473_10556642 | NA | coding | upstream | 51058 | 10540415 ~ 10556688 (-) |
| CI01000013_10560692_10562065 | NA | coding | upstream | 70940 | 10560297 ~ 10562280 (-) |
| CI01000013_10564288_10569141 | NA | coding | upstream | 74361 | 10563459 ~ 10569290 (-) |
| CI01000013_10597504_10610862 | IMPDH1B, IMPDH1, IMPDH1A | coding | upstream | 108147 | 10597504 ~ 10610862 (-) |
| CI01000013_10799938_10806858 | PRPF18 | coding | upstream | 309241 | 10798598 ~ 10806858 (-) |
| G85172 | NA | non-coding | downstream | 1211 | 10487359 ~ 10487623 (-) |
| G85171 | NA | non-coding | downstream | 2484 | 10486127 ~ 10486350 (-) |
| G85167 | NA | non-coding | downstream | 14127 | 10474494 ~ 10474707 (-) |
| G85069 | NA | non-coding | downstream | 16326 | 10471917 ~ 10472508 (-) |
| G85155 | NA | non-coding | downstream | 41535 | 10446917 ~ 10447299 (-) |
| G85174 | NA | non-coding | upstream | 457 | 10489814 ~ 10490209 (-) |
| G85186 | NA | non-coding | upstream | 38029 | 10527386 ~ 10534187 (-) |
| G85190 | NA | non-coding | upstream | 61571 | 10550928 ~ 10551270 (-) |
| G85196 | NA | non-coding | upstream | 97014 | 10586371 ~ 10587130 (-) |
| G85201 | NA | non-coding | upstream | 132173 | 10621530 ~ 10684563 (-) |
| G85170 | NA | other | downstream | 8134 | 10479861 ~ 10480700 (-) |
| CI01000013_09309438_09335834 | MICAL3A | other | downstream | 1165990 | 9307036 ~ 9336077 (-) |
| CI01000013_07339918_07367774 | NA | other | downstream | 3106474 | 7339709 ~ 7367774 (-) |
| CI01000013_05883498_05884071 | CHTF8 | other | downstream | 4604462 | 5882049 ~ 5884071 (-) |
| G81547 | NA | other | downstream | 4744796 | 5739526 ~ 5744038 (-) |
| G85188 | NA | other | upstream | 102847 | 10592204 ~ 10595337 (-) |
| G85401 | NA | other | upstream | 545675 | 11035032 ~ 11035466 (-) |
| CI01000013_11596784_11604320 | NA | other | upstream | 1109703 | 11596688 ~ 11604865 (-) |
