CI01000013_10560692_10562065


Basic Information

Item Value
gene id CI01000013_10560692_10562065
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10560297 ~ 10562280 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_10560692_10562065.mRNA
AAATTTTCCATGTAATTTCGCATAACCAACAAAATAACCTCATGACAATTTCCCCTAACAATATTTCCCTGTGTTCCATTAAAAGATAAAATATATATAAAATAACACCCTTTGTGCTGCCTCAGCCAGAGGCATGATCTGGAGAAATGAGAAAGTCTTTTCAGGACTGATCATGAGTGCAGGAGGTTGGGGGGTTCAGAAATGATCCGTTCCTCATGACCAGAATCCCTCTCCGTCCCACCAGCAACATGGATGATTTCAGGACGAGCATCAGTGGCGCAGACAACACGCTGTTTGGAGAGACTTTAACGCGGGTAACCGTCATCAGCTCATTCGTCTTCCCTACACCTCCTCCAACACCATTAAATATCTTCTTTGTGGTCTGCATCATCATGATCTGTTCCTCTGTATTGGTGCTGATTTTCTGGTATCGTCAAGGTGATCTGGATCCAAAATTTCGTGGTCTGATTTATTATTCCATTGGTCCCATTATCCTTCTCTGTCTGTGTGCAAATCTGTACTTCCATGATGTTGGAAGATGACATGATTCAGACACACCACTCATACTGAGCACCGTATTAATTCTCGCAAGCAAGTTGTAAAATTATTATAAAAGGTAGTTTATCTGTCAAAAAGGAGCCTCACAGTTTTCATTGTGTATATAGATCTGATACTTGTTCAAATCTACCAGTTTATTATGTATATTTGGACAGTGTACATTATGTATTTTTTTTATGCCAAAGTTGAATAATTATATACTAAATATTTGTTCATTATTTTCTGTTGATGTCAAGAGTCATGCTAAATGCTGCAGTATTTCAGTAGAGTTACTTGTATAAATTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTCCTTCTTTTGTTCTGTGAACAATGCTGGTACAAAAGGTCTGAGCCCTGACATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_10560692_10562065.mRNA True 937 mRNA 0.37 3 10560297 10562280

Neighbor

gene id symbol gene type direction distance location
CI01000013_10540473_10556642 NA coding downstream 3609 10540415 ~ 10556688 (-)
CI01000013_10338616_10372320 SEMA3D coding downstream 185141 10338538 ~ 10375156 (-)
CI01000013_10218387_10244139 SEMA3A, SEMA3AB coding downstream 316158 10218370 ~ 10244139 (-)
CI01000013_10127318_10157548 SEMA3E coding downstream 402749 10127196 ~ 10157548 (-)
CI01000013_10037048_10083444 PCLOB coding downstream 476853 10037048 ~ 10083444 (-)
CI01000013_10564288_10569141 NA coding upstream 1438 10563459 ~ 10569290 (-)
CI01000013_10597504_10610862 IMPDH1B, IMPDH1, IMPDH1A coding upstream 35224 10597504 ~ 10610862 (-)
CI01000013_10799938_10806858 PRPF18 coding upstream 236318 10798598 ~ 10806858 (-)
CI01000013_10828622_10836409 CPT1, CPT1B coding upstream 266251 10828531 ~ 10837146 (-)
CI01000013_10838711_10841053 NA coding upstream 276217 10838497 ~ 10841564 (-)
G85190 NA non-coding downstream 9027 10550928 ~ 10551270 (-)
G85186 NA non-coding downstream 26110 10527386 ~ 10534187 (-)
G85174 NA non-coding downstream 70088 10489814 ~ 10490209 (-)
G85173 NA non-coding downstream 70940 10488834 ~ 10489357 (-)
G85172 NA non-coding downstream 72674 10487359 ~ 10487623 (-)
G85196 NA non-coding upstream 24091 10586371 ~ 10587130 (-)
G85201 NA non-coding upstream 59250 10621530 ~ 10684563 (-)
G85262 NA non-coding upstream 194532 10756812 ~ 10760487 (-)
G85311 NA non-coding upstream 211500 10773780 ~ 10776213 (-)
G85343 NA non-coding upstream 338207 10900487 ~ 10900711 (-)
G85170 NA other downstream 79597 10479861 ~ 10480700 (-)
CI01000013_09309438_09335834 MICAL3A other downstream 1237453 9307036 ~ 9336077 (-)
CI01000013_07339918_07367774 NA other downstream 3177937 7339709 ~ 7367774 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 4675925 5882049 ~ 5884071 (-)
G81547 NA other downstream 4816259 5739526 ~ 5744038 (-)
G85188 NA other upstream 29924 10592204 ~ 10595337 (-)
G85401 NA other upstream 472752 11035032 ~ 11035466 (-)
CI01000013_11596784_11604320 NA other upstream 1036780 11596688 ~ 11604865 (-)

Expression


Co-expression Network