G81547


Basic Information

Item Value
gene id G81547
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5739526 ~ 5744038 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92795
CTTGCACTTTGAATGTCCTTCTGGACTCTTTATTTCCCATGCATAGTTTGGACAAGTGTGTAGTGGAACTTTTTGTAGATGAAATTAAAAAAAAAAAAAAATCAAAACAAACCCAAAGAAAAAGGTTGACATTCATTCTTTTTCCATCAACATTTTTAATTATTCACAAAGTATTTTAATTACCTTTCACTTGCGTTAGAATGTTCTAAATTCACGAGTAAGTCCTTCGGGGATAGGTTTGGACAAGAAAAAGTGCTGTAAAAACATAAATACATACAAAAAAGCTTCTAAAACTAAAACATTCAGCATTTTTGTACAACACAGTGCAATAGAAAAGGGATCTGGAAAGGTCAAAGGTTTTCAGCACTGGTCTTTTGGACTTGTGACAGTCGCTAAATGATAAAACAATGGAATTGTAAACGCCCCTGTATGTGTTCATGACGGTTGCAGCACCGTTTCAAACCACAACAGCAGAGAGAAATTTAAACTTTTCTCATTTGCACGCAGTTTTGCATGTTCCTGTTCTTACCGCAGAGATGACTGAGGTTTTCTTCTTGTAACACAGGAAATGGGAAAACACCACTTGTAACATACACAAAGTCCACTTAGTGGGGGAGAGTGACGAGCATTGTGGACATAAGTGACCCGTTGTATCAGACATAGTGACGAGAGTCTTTGTTAAGGCTTTGCCAAGGTAGCCTGCACAGGAGGATAGATTGCATGACGCTGTTTTTTTTTCAACATACACGCACATGTAGGAGCATAAAACGTCAATGAGTCATCATTGAGAATGCAAAATTGAAAGAGAAACAGCGCAATTGAGAGAAGGACAAGAGTGACGCTGCGTTGCCAGTTTAAGAAAGAAGCAATACGAGCAATGAGTCAGTTTTGAATTCTCTTGCTTTCAGTGGCCTTCAACATTATTCAACAATGAGTGTGCAAGACATTGATATGAATCTTTTCTATGCTATACTTCATTTCAAGGTTAAAAGAAAAAGAAAAAAAGACCAAACAAACATGCTTTTCTTTGCATGTCCACAACAGTTTGTGTAGAGTACAGATGGCACTTTTTCAGCAGGTCAAAAGGGTTTTGGATTTGAAGCAGTGAAGGTTTTGTGTTAGGGACAAAGACAAGGTGAGCTGGTGACTAGAGACAGAACAAACATCTTACGCTGTTCGAAATCCAAACCCTAAAACCCTACGACAGTCCTTAGATCCGAAATGCACATCCATCTGATGGAAAATGTCTGTCTGGGAGCCATGACCAAATACTAAGACAGTATAGTGTGTGCCGTCTTCTCCCGTACTAGACAAACACTTACAGAATTACTTCCCAAGTCCCATTGATCAATGCAAAAAAAGTCAAATATGACACATTTCCATATGCAAGAACCAAGAAAATACATCACACTGAAGACTGAAATGGTTCCTTTTGACAGTATTAAAACAAAAAGTATTTCTTTAAAAAGAAACTAGGTAGTATTTAACTTGCATGAAATGCGTGAGGACTCAAATGATAAATAGTTTCTTCACATTTTTCTTTCATCTTGAACTGGTAACCAGGTGACACCAATTTCAACTGGCTTACTCAGTTGTATACTCAATTTTTTTTGAGTCAGTGTATTGACAAAAATCTGCAGACTGGATTCTATAAAGACCTCCACTAGGGGTCAGAGTTTACCTCAAATTAGCAATTTAGAACAAAAAACAAAAATGGCTCAGACAAACAATCTTACAAATATACAACGCCATCATTGATTAGAAGGAACATAAAAATATAGGAGTGATTAAACAACATTTTCAAAGCTAATTAAAGGGTTACGTTCCATCAGCAGATTTCTAAACTCAGAGGTGAAATGAGAAGTCTGCAGGGATGTGGGAATAGGTCAGGGGGCACATTCTGTGTGCAGGTAGTCTCATCTCTTAGTGTGATAAAAACTTGACCCAAAACATGTAATAAGTTACCATAGTAACAACACCAGATAACATGGTCGACATGGAGACCTCTGCATCTGGCTAGTAACAGTCCCGTTATCATGCTCTGTCCAGATCAGGTCGGGTAGTGCCATGATTGGCACTTCTATGCATGAGAGGAATGGCAGAATTGACTAGGTAAAGGGCTCACTTGACATGTTCGGCACTGTGAGAGGAACAGTAGTATTTTTTGTGTGCAATGAAAGTGGAAAGGCTGCTGAATTTGATGTTACACAGCCGGCAGTAGCGTGTGTTCCCATTCTGCAGGGGTGAGGCGAGGGGTGTTTTAGGCATGGGTGGAGTTGTGTGGGCGTGGCTTATAGCAAGGACCGCCTTTTCAGGGAGGAGTGCGGGCAATGGGGTGTGGCCTAGCTGCCCAACTTCTCTTAGCGCTTCAGGCACAGGTGATACAGTTACTCCTGTAGGGGAGAGGGCAGGGGGTGCGGTTTTTGGAGAGCCAGACCCCACAGACTGGGGTTCTAGTGGACTTCCATTAAGTACAGGTGAGGAAGGAGAGGTTGCTTCCAACTTGATGCTCCGGCCATTCACACTGTCCTTACGGGGCCGAGGGCTTGGTTTAGGAGGGGTGAGAGGAGCTCCTTCCCGAGGGCTAAGGCTAGGACTGGGACTGACTCCAGCGGACTGCGTCTCAAGATGTTGCTGTAGTGTGAGCACCAGACCATGAGTCGTTTTAAAATGCTCCATCAGATCACAGGTTAGCAGTTTGTTGGGAGGGCAGTAGGGACACACTACTGGGGAGGTGCTTGGGGTCTTTGCTCCCTGCACATGTGGAGGGGTGGATTCAGAGCCAAGCAAGGTGGATGGATGCGCAACCGCTGCAGTTTTACCTGTCTGAAGCCCTTTGGCCTCAGGGTGCAGGTCCACAGCTCGGTTCTTCGGTGAGGTGGAAGCGGGTCTCTTTAGCCGGTTAAGCTGCTCCATAGTGTGTGGTTGCAGGGTAGTTGCCGGACAGTAGTAGGTCTTGTGGGCCAGGTAGTTCTCTATGCTGTTGAAGCTAATGCTGCAGGCGGTGCACTTGTGGTAGTCAGCAAGGGGCAGAGCGGGAATGCTGCCCCCACTCTGGCTTTCTCTGAGTCGGGGTCTTTTACTCAAGTCAATGGGTCCGTCGCCTTCAGGACTTGAGCTTTGTGTTGGGGTGGACACTTGGGGCAATGGAGGAATGGAAGGGCCCTCTTGTTTCACCCCCAGACTTGCTGCTGTCGGCAAAGCAGTGGCATTAGCCAAAGCCTCGGTTTGAGCCATGTGGATCTCATACATCTTCTTGCGCTTGCGTGTGCGGATAGGTTGGGGAAGGAAGGCGGTCTTGCCAGAATGGGGTCGCTGGTTGGAGGGATCATGTCTCGAGGCGCAGTAGAATCGCTTGTGGACAATGTAGTTATCGTGACGACTGAAGCGGATATTGCAGGCCTGGCAGAAGGTGCGAGTGGGATCGTCGTCTGTGTCGTCGGCGGAGCCACTAGGACTTTGGCTACCCTCGCTGGCCTGCCCACCCCCAGGTCCCTCTCCCTCTGAGGACGACGAGCAGGTGACATCTTTCATCCCTGGATCCTCACTTTTCACCTCCACTAACTTGGGCTCAGAGGCTGTGCCTCCTGTTGCAGGGTCGGGGTAGCTAGGAGAGGCCGAAGCCGCACGACTGACCGGTCTGGCCTGGGGTGAAGCAGCGTGGGCAGCAGGAGGAGCAGCTGCAGTGACCGCTCCTTCCTTCATCAGGCCTGCTGCCTCTCCTTGCTGATGCCTGCTTGAGCAGTAAAGCCTCTTGTGGACGTAGAAGTTGTTGATGTTGTTGAAGGTAATGTCACATTCAAAGCAAGTGGCTCCCTTCTGAACGCTGGCAGGAGAGCCTGGTGGATAGAAGCTCTGCTGTCCGGCTGCTGGCCCTTGTCCCTGTTTAAGCCTACTGTGTACCATTTCAGACATCTTAGCCAGAATCTCAGACGCTTGTGGCATTATGGCAGCCTCAGAATTGAACATGTACTGCGGTAAGAACATCGTCCCTCCAGATAGAACCGAACCCCCTGTTCCAGGGTGTGCGGGACTGGAACCTGGTGTGGGACTGGTCGGCTCTGTCTTAACCGCCACCACCGTGGGGCTCTTAGGTGAAGTAGACTGAGATGAGCTTTCCTCCACAGCATTTCCTTGAGGACTGCCCACCTGTTCTTCTTCCTTTGTATCATTTTCATAGTCTGAACGTGGCTCCTCTTTGATGATGAGTTGGTTGAGGGGGCTGCAGCCTTGAGAGGCAGAGCTGCCATTGGCTCCTGGGCTGGAAGAGTCGGGACGTGGGACGCAGGCATCAAGCTCCCTCTCTTGCGGGTCTTGGAGCTCAGAGGAAGTAGGACTGCTCTGGCGAGGCGTGGGGCTCCTCTCAGCTGGAACCCTCACTTCCAGGTGAGTGTGGACATGCTGCTGGAGTAGGGCAGGTGTGTCAGCAGAGTAGCCACACACTTGACATTTCAGAACAATGCCAGAGTCCCCTGGACTCAAG
>TU92796
CTTGCACTTTGAATGTCCTTCTGGACTCTTTATTTCCCATGCATAGTTTGGACAAGTGTGTAGTGGAACTTTTTGTAGATGAAATTAAAAAAAAAAAAAAAAAAAAAAAAATCAAAACAAACCCAAAGAAAAAGGTTGACATTCATTCTTTTTCCATCAACATTTTTAATTATTCACAAAGTATTTTAATTACCTTTCACTTGCGTTAGAATGTTCTAAATTCACGAGTAAGTCCTTCGGGGATAGGTTTGGACAAGAAAAAGTGCTGTAAAAACATAAATACATACAAAAAAGCTTCTAAAACTAAAACATTCAGCATTTTTGTACAACACAGTGCAATAGAAAAGGGATCTGGAAAGGTCAAAGGTTTTCAGCACTGGTCTTTTGGACTTGTGACAGTCGCTAAATGATAAAACAATGGAATTGTAAACGCCCCTGTATGTGTTCATGACGGTTGCAGCACCGTTTCAAACCACAACAGCAGAGAGAAATTTAAACTTTTCTCATTTGCACGCAGTTTTGCATGTTCCTGTTCTTACCGCAGAGATGACTGAGGTTTTCTTCTTGTAACACAGGAAATGGGAAAACACCACTTGTAACATACACAAAGTCCACTTAGTGGGGGAGAGTGACGAGCATTGTGGACATAAGTGACCCGTTGTATCAGACATAGTGACGAGAGTCTTTGTTAAGGCTTTGCCAAGGTAGCCTGCACAGGAGGATAGATTGCATGACGCTGTTTTTTTTTCAACATACACGCACATGTAGGAGCATAAAACGTCAATGAGTCATCATTGAGAATGCAAAATTGAAAGAGAAACAGCGCAATTGAGAGAAGGACAAGAGTGACGCTGCGTTGCCAGTTTAAGAAAGAAGCAATACGAGCAATGAGTCAGTTTTGAATTCTCTTGCTTTCAGTGGCCTTCAACATTATTCAACAATGAGTGTGCAAGACATTGATATGAATCTTTTCTATGCTATACTTCATTTCAAGGTTAAAAGAAAAAGAAAAAAAGACCAAACAAACATGCTTTTCTTTGCATGTCCACAACAGTTTGTGTAGAGTACAGATGGCACTTTTTCAGCAGGTCAAAAGGGTTTTGGATTTGAAGCAGTGAAGGTTTTGTGTTAGGGACAAAGACAAGGTGAGCTGGTGACTAGAGACAGAACAAACATCTTACGCTGTTCGAAATCCAAACCCTAAAACCCTACGACAGTCCTTAGATCCGAAATGCACATCCATCTGATGGAAAATGTCTGTCTGGGAGCCATGACCAAATACTAAGACAGTATAGTGTGTGCCGTCTTCTCCCGTACTAGACAAACACTTACAGAATTACTTCCCAAGTCCCATTGATCAATGCAAAAAAAGTCAAATATGACACATTTCCATATGCAAGAACCAAGAAAATACATCACACTGAAGACTGAAATGGTTCCTTTTGACAGTATTAAAACAAAAAGTATTTCTTTAAAAAGAAACTAGGTAGTATTTAACTTGCATGAAATGCGTGAGGACTCAAATGATAAATAGTTTCTTCACATTTTTCTTTCATCTTGAACTGGTAACCAGGTGACACCAATTTCAACTGGCTTACTCAGTTGTATACTCAATTTTTTTTGAGTCAGTGTATTGACAAAAATCTGCAGACTGGATTCTATAAAGACCTCCACTAGGGGTCAGAGTTTACCTCAAATTAGCAATTTAGAACAAAAAACAAAAATGGCTCAGACAAACAATCTTACAAATATACAACGCCATCATTGATTAGAAGGAACATAAAAATATAGGAGTGATTAAACAACATTTTCAAAGCTAATTAAAGGGTTACGTTCCATCAGCAGATTTCTAAACTCAGAGGTGAAATGAGAAGTCTGCAGGGATGTGGGAATAGGTCAGGGGGCACATTCTGTGTGCAGGTAGTCTCATCTCTTAGTGTGATAAAAACTTGACCCAAAACATGTAATAAGTTACCATAGTAACAACACCAGATAACATGGTCGACATGGAGACCTCTGCATCTGGCTAGTAACAGTCCCGTTATCATGCTCTGTCCAGATCAGGTCGGGTAGTGCCATGATTGGCACTTCTATGCATGAGAGGAATGGCAGAATTGACTAGGTAAAGGGCTCACTTGACATGTTCGGCACTGTGAGAGGAACAGTAGTATTTTTTGTGTGCAATGAAAGTGGAAAGGCTGCTGAATTTGATGTTACACAGCCGGCAGTAGCGTGTGTTCCCATTCTGCAGGGGTGAGGCGAGGGGTGTTTTAGGCATGGGTGGAGTTGTGTGGGCGTGGCTTATAGCAAGGACCGCCTTTTCAGGGAGGAGTGCGGGCAATGGGGTGTGGCCTAGCTGCCCAACTTCTCTTAGCGCTTCAGGCACAGGTGATACAGTTACTCCTGTAGGGGAGAGGGCAGGGGGTGCGGTTTTTGGAGAGCCAGACCCCACAGACTGGGGTTCTAGTGGACTTCCATTAAGTACAGGTGAGGAAGGAGAGGTTGCTTCCAACTTGATGCTCCGGCCATTCACACTGTCCTTACGGGGCCGAGGGCTTGGTTTAGGAGGGGTGAGAGGAGCTCCTTCCCGAGGGCTAAGGCTAGGACTGGGACTGACTCCAGCGGACTGCGTCTCAAGATGTTGCTGTAGTGTGAGCACCAGACCATGAGTCGTTTTAAAATGCTCCATCAGATCACAGGTTAGCAGTTTGTTGGGAGGGCAGTAGGGACACACTACTGGGGAGGTGCTTGGGGTCTTTGCTCCCTGCACATGTGGAGGGGTGGATTCAGAGCCAAGCAAGGTGGATGGATGCGCAACCGCTGCAGTTTTACCTGTCTGAAGCCCTTTGGCCTCAGGGTGCAGGTCCACAGCTCGGTTCTTCGGTGAGGTGGAAGCGGGTCTCTTTAGCCGGTTAAGCTGCTCCATAGTGTGTGGTTGCAGGGTAGTTGCCGGACAGTAGTAGGTCTTGTGGGCCAGGTAGTTCTCTATGCTGTTGAAGCTAATGCTGCAGGCGGTGCACTTGTGGTAGTCAGCAAGGGGCAGAGCGGGAATGCTGCCCCCACTCTGGCTTTCTCTGAGTCGGGGTCTTTTACTCAAGTCAATGGGTCCGTCGCCTTCAGGACTTGAGCTTTGTGTTGGGGTGGACACTTGGGGCAATGGAGGAATGGAAGGGCCCTCTTGTTTCACCCCCAGACTTGCTGCTGTCGGCAAAGCAGTGGCATTAGCCAAAGCCTCGGTTTGAGCCATGTGGATCTCATACATCTTCTTGCGCTTGCGTGTGCGGATAGGTTGGGGAAGGAAGGCGGTCTTGCCAGAATGGGGTCGCTGGTTGGAGGGATCATGTCTCGAGGCGCAGTAGAATCGCTTGTGGACAATGTAGTTATCGTGACGACTGAAGCGGATATTGCAGGCCTGGCAGAAGGTGCGAGTGGGATCGTCGTCTGTGTCGTCGGCGGAGCCACTAGGACTTTGGCTACCCTCGCTGGCCTGCCCACCCCCAGGTCCCTCTCCCTCTGAGGACGACGAGCAGGTGACATCTTTCATCCCTGGATCCTCACTTTTCACCTCCACTAACTTGGGCTCAGAGGCTGTGCCTCCTGTTGCAGGGTCGGGGTAGCTAGGAGAGGCCGAAGCCGCACGACTGACCGGTCTGGCCTGGGGTGAAGCAGCGTGGGCAGCAGGAGGAGCAGCTGCAGTGACCGCTCCTTCCTTCATCAGGCCTGCTGCCTCTCCTTGCTGATGCCTGCTTGAGCAGTAAAGCCTCTTGTGGACGTAGAAGTTGTTGATGTTGTTGAAGGTAATGTCACATTCAAAGCAAGTGGCTCCCTTCTGAACGCTGGCAGGAGAGCCTGGTGGATAGAAGCTCTGCTGTCCGGCTGCTGGCCCTTGTCCCTGTTTAAGCCTACTGTGTACCATTTCAGACATCTTAGCCAGAATCTCAGACGCTTGTGGCATTATGGCAGCCTCAGAATTGAACATGTACTGCGGTAAGAACATCGTCCCTCCAGATAGAACCGAACCCCCTGTTCCAGGGTGTGCGGGACTGGAACCTGGTGTGGGACTGGTCGGCTCTGTCTTAACCGCCACCACCGTGGGGCTCTTAGGTGAAGTAGACTGAGATGAGCTTTCCTCCACAGCATTTCCTTGAGGACTGCCCACCTGTTCTTCTTCCTTTGTATCATTTTCATAGTCTGAACGTGGCTCCTCTTTGATGATGAGTTGGTTGAGGGGGCTGCAGCCTTGAGAGGCAGAGCTGCCATTGGCTCCTGGGCTGGAAGAGTCGGGACGTGGGACGCAGGCATCAAGCTCCCTCTCTTGCGGGTCTTGGAGCTCAGAGGAAGTAGGACTGCTCTGGCGAGGCGTGGGGCTCCTCTCAGCTGGAACCCTCACTTCCAGGTGAGTGTGGACATGCTGCTGGAGTAGGGCAGGTGTGTCAGCAGAGTAGCCACACACTTGACATTTCAGAACAATGCCAGAGTCCCCTGGACTCAAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92795 False 4483 lncRNA 0.47 2 5739526 5744038
TU92796 True 4493 TUCP 0.47 2 5739526 5744038

Neighbor

gene id symbol gene type direction distance location
CI01000013_05688638_05691660 NA coding downstream 47598 5688583 ~ 5691928 (-)
CI01000013_05652235_05656208 NA coding downstream 83069 5652118 ~ 5656457 (-)
CI01000013_05638498_05647534 NA coding downstream 91992 5638478 ~ 5647534 (-)
CI01000013_05626666_05631514 NA coding downstream 107880 5626113 ~ 5631646 (-)
CI01000013_05592121_05601330 CUNH16ORF70, CLG7H16ORF70, C11H16ORF70, C4H16ORF70, C2H16ORF70, C14H16ORF70, C5H16ORF70, C16H16ORF70, C18H16ORF70, CE2H16ORF70, CLG19H16ORF70, C20H16ORF70 coding downstream 138196 5592121 ~ 5601330 (-)
CI01000013_05793138_05803928 TRHR2 coding upstream 47499 5790763 ~ 5804176 (-)
CI01000013_05883498_05884071 CHTF8 coding upstream 138819 5882049 ~ 5884071 (-)
CI01000013_05905378_05906438 NA coding upstream 161206 5905244 ~ 5907255 (-)
CI01000013_05911902_05917100 NA coding upstream 167423 5911461 ~ 5917579 (-)
CI01000013_05928871_05930892 NA coding upstream 184685 5928723 ~ 5930892 (-)
G81570 NA non-coding downstream 43427 5692026 ~ 5696099 (-)
G81546 NA non-coding downstream 128002 5611325 ~ 5611524 (-)
G81545 NA non-coding downstream 128367 5610861 ~ 5611159 (-)
G81543 NA non-coding downstream 129937 5607157 ~ 5609589 (-)
G81540 NA non-coding downstream 154325 5585001 ~ 5585201 (-)
G81605 NA non-coding upstream 10231 5754269 ~ 5754482 (-)
G81610 NA non-coding upstream 18427 5762465 ~ 5762697 (-)
G81620 NA non-coding upstream 26731 5770769 ~ 5770986 (-)
G81622 NA non-coding upstream 30936 5774974 ~ 5775179 (-)
G81032 NA other downstream 988965 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 1180623 4560340 ~ 4567647 (-)
G80443 NA other downstream 1673509 4064942 ~ 4066017 (-)
G80399 NA other downstream 1833286 3904067 ~ 3906240 (-)
G80271 NA other downstream 2015919 3719433 ~ 3723607 (-)
CI01000013_07339918_07367774 NA other upstream 1595671 7339709 ~ 7367774 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 3562998 9307036 ~ 9336077 (-)
G85170 NA other upstream 4735823 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 4819421 10563459 ~ 10569290 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location