G81620


Basic Information

Item Value
gene id G81620
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5770769 ~ 5770986 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92884
GTTCATTCTCTGCAAAAGGTTTGTTCTAGCGTGTTGGTTGTGCTTCTGTTTATGTTCGCTGATCAATGTTTATATGTGAATAAAAGCCTAAATTCAATCTGTTCATCATATAAAGTGATTGTGTCTCTTCAGAAAATTTGGACTAAACCACTTGATTCATATGGATTAGTTTTACGATCTCTTTATGAACATTTTGAAGCGTCAAAGTGGTAGTTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92884 True 218 lncRNA 0.34 1 5770769 5770986

Neighbor

gene id symbol gene type direction distance location
CI01000013_05688638_05691660 NA coding downstream 78841 5688583 ~ 5691928 (-)
CI01000013_05652235_05656208 NA coding downstream 114312 5652118 ~ 5656457 (-)
CI01000013_05638498_05647534 NA coding downstream 123235 5638478 ~ 5647534 (-)
CI01000013_05626666_05631514 NA coding downstream 139123 5626113 ~ 5631646 (-)
CI01000013_05592121_05601330 CUNH16ORF70, CLG7H16ORF70, C11H16ORF70, C4H16ORF70, C2H16ORF70, C14H16ORF70, C5H16ORF70, C16H16ORF70, C18H16ORF70, CE2H16ORF70, CLG19H16ORF70, C20H16ORF70 coding downstream 169439 5592121 ~ 5601330 (-)
CI01000013_05793138_05803928 TRHR2 coding upstream 20551 5790763 ~ 5804176 (-)
CI01000013_05883498_05884071 CHTF8 coding upstream 111871 5882049 ~ 5884071 (-)
CI01000013_05905378_05906438 NA coding upstream 134258 5905244 ~ 5907255 (-)
CI01000013_05911902_05917100 NA coding upstream 140475 5911461 ~ 5917579 (-)
CI01000013_05928871_05930892 NA coding upstream 157737 5928723 ~ 5930892 (-)
G81610 NA non-coding downstream 8072 5762465 ~ 5762697 (-)
G81605 NA non-coding downstream 16287 5754269 ~ 5754482 (-)
G81547 NA non-coding downstream 26731 5739526 ~ 5744038 (-)
G81570 NA non-coding downstream 74670 5692026 ~ 5696099 (-)
G81546 NA non-coding downstream 159245 5611325 ~ 5611524 (-)
G81622 NA non-coding upstream 3988 5774974 ~ 5775179 (-)
G82728 NA non-coding upstream 48568 5819554 ~ 5837068 (-)
G82763 NA non-coding upstream 113995 5884981 ~ 5885204 (-)
G82765 NA non-coding upstream 129853 5900839 ~ 5901055 (-)
G81032 NA other downstream 1020208 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 1211866 4560340 ~ 4567647 (-)
G80443 NA other downstream 1704752 4064942 ~ 4066017 (-)
G80399 NA other downstream 1864529 3904067 ~ 3906240 (-)
CI01000013_07339918_07367774 NA other upstream 1568723 7339709 ~ 7367774 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 3536050 9307036 ~ 9336077 (-)
G85170 NA other upstream 4708875 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 4792473 10563459 ~ 10569290 (-)

Expression


Co-expression Network