G81622


Basic Information

Item Value
gene id G81622
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5774974 ~ 5775179 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92886
ACAACTTTATTTAAAAACATGTTCGCTGATTATGATCTGCGCTGTGTATGAATACTTATCCACTTTTTCATGAGAAATGCTGTCCAAATGTCCTGTTTGTCATGATGACGTCTAAAGTCCCTGCCAAAGGAAGTAGTCTCTTTTAGCAATTTGTTAGCAACAACCGTTTTTAAGACACAATAAAGGTTTAAAAAATCACAAGCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92886 True 206 lncRNA 0.36 1 5774974 5775179

Neighbor

gene id symbol gene type direction distance location
CI01000013_05688638_05691660 NA coding downstream 83046 5688583 ~ 5691928 (-)
CI01000013_05652235_05656208 NA coding downstream 118517 5652118 ~ 5656457 (-)
CI01000013_05638498_05647534 NA coding downstream 127440 5638478 ~ 5647534 (-)
CI01000013_05626666_05631514 NA coding downstream 143328 5626113 ~ 5631646 (-)
CI01000013_05592121_05601330 CUNH16ORF70, CLG7H16ORF70, C11H16ORF70, C4H16ORF70, C2H16ORF70, C14H16ORF70, C5H16ORF70, C16H16ORF70, C18H16ORF70, CE2H16ORF70, CLG19H16ORF70, C20H16ORF70 coding downstream 173644 5592121 ~ 5601330 (-)
CI01000013_05793138_05803928 TRHR2 coding upstream 16358 5790763 ~ 5804176 (-)
CI01000013_05883498_05884071 CHTF8 coding upstream 107678 5882049 ~ 5884071 (-)
CI01000013_05905378_05906438 NA coding upstream 130065 5905244 ~ 5907255 (-)
CI01000013_05911902_05917100 NA coding upstream 136282 5911461 ~ 5917579 (-)
CI01000013_05928871_05930892 NA coding upstream 153544 5928723 ~ 5930892 (-)
G81620 NA non-coding downstream 3988 5770769 ~ 5770986 (-)
G81610 NA non-coding downstream 12277 5762465 ~ 5762697 (-)
G81605 NA non-coding downstream 20492 5754269 ~ 5754482 (-)
G81547 NA non-coding downstream 30936 5739526 ~ 5744038 (-)
G81570 NA non-coding downstream 78875 5692026 ~ 5696099 (-)
G82728 NA non-coding upstream 44375 5819554 ~ 5837068 (-)
G82763 NA non-coding upstream 109802 5884981 ~ 5885204 (-)
G82765 NA non-coding upstream 125660 5900839 ~ 5901055 (-)
G82768 NA non-coding upstream 133077 5908256 ~ 5908611 (-)
G81032 NA other downstream 1024413 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 1216071 4560340 ~ 4567647 (-)
G80443 NA other downstream 1708957 4064942 ~ 4066017 (-)
G80399 NA other downstream 1868734 3904067 ~ 3906240 (-)
CI01000013_07339918_07367774 NA other upstream 1564530 7339709 ~ 7367774 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 3531857 9307036 ~ 9336077 (-)
G85170 NA other upstream 4704682 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 4788280 10563459 ~ 10569290 (-)

Expression


Co-expression Network