CI01000013_05688638_05691660


Basic Information

Item Value
gene id CI01000013_05688638_05691660
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5688583 ~ 5691928 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_05688638_05691660.mRNA
AGGATTTCTTTACATTGCTGGGAAGAGGGAAGGGAAGAAAAAAACAGAAACGGCAGCGGCAGTTCCCCAGGAAGACTACTTAAACGATTAAATATCCCCCATTCCCCTTTTTCTCCTTTTGATAACAGGGAGGGAAAATTTAAAGAATTCACAGTGCTTTAGGTTCAACTATACTAATCAGAGATAGAGAGAAGAAAATTAACTCCTTAATGAGCAGGAGCTGTCTGCCAGATAATGGTCAAGGAGAGGCGATAGGGCTGGAGACTGAATGAGAAAGAAAGAAAAGAGGAATAAAAACATAGATGGATTCACCGAACAGGGGAGAAATCAGATTTTACCCCTGCTCTGGAAATTGTTCTTTGTGTCCACAGAGGGCAGGCAGCTTATCTTCTGGCTCTTGTCTGCGTGCCTGGCTTCGATAGTCCAGGGTCTCCACTCCGGCTGCCTGGCAACTTCACTCCCCCCAGTTCAATCTCTCCTCCTCTCTCCTCACGCCACGCTCACCCCACCTTACAAGCAAGTGCAGGAGGAGCAAAGCGGAAAACTTCTGTTTATGATTAAAAGCGGAAATGTTCTTAAGAAGTGAGGATGGACAAAGAGGTTCTAAAACCTAGATAGTTAACTACCAAAACAGCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_05688638_05691660.mRNA True 641 mRNA 0.45 2 5688583 5691928

Neighbor

gene id symbol gene type direction distance location
CI01000013_05652235_05656208 NA coding downstream 32126 5652118 ~ 5656457 (-)
CI01000013_05638498_05647534 NA coding downstream 41049 5638478 ~ 5647534 (-)
CI01000013_05626666_05631514 NA coding downstream 56937 5626113 ~ 5631646 (-)
CI01000013_05592121_05601330 CUNH16ORF70, CLG7H16ORF70, C11H16ORF70, C4H16ORF70, C2H16ORF70, C14H16ORF70, C5H16ORF70, C16H16ORF70, C18H16ORF70, CE2H16ORF70, CLG19H16ORF70, C20H16ORF70 coding downstream 87253 5592121 ~ 5601330 (-)
CI01000013_05561156_05569165 NUP93 coding downstream 119418 5561070 ~ 5569165 (-)
CI01000013_05793138_05803928 TRHR2 coding upstream 99609 5790763 ~ 5804176 (-)
CI01000013_05883498_05884071 CHTF8 coding upstream 190929 5882049 ~ 5884071 (-)
CI01000013_05905378_05906438 NA coding upstream 213316 5905244 ~ 5907255 (-)
CI01000013_05911902_05917100 NA coding upstream 219533 5911461 ~ 5917579 (-)
CI01000013_05928871_05930892 NA coding upstream 236795 5928723 ~ 5930892 (-)
G81546 NA non-coding downstream 77059 5611325 ~ 5611524 (-)
G81545 NA non-coding downstream 77424 5610861 ~ 5611159 (-)
G81543 NA non-coding downstream 78994 5607157 ~ 5609589 (-)
G81540 NA non-coding downstream 103382 5585001 ~ 5585201 (-)
G81539 NA non-coding downstream 105315 5582596 ~ 5583268 (-)
G81570 NA non-coding upstream 98 5692026 ~ 5696099 (-)
G81547 NA non-coding upstream 47598 5739526 ~ 5744038 (-)
G81605 NA non-coding upstream 62341 5754269 ~ 5754482 (-)
G81610 NA non-coding upstream 70537 5762465 ~ 5762697 (-)
G81620 NA non-coding upstream 78841 5770769 ~ 5770986 (-)
G81032 NA other downstream 938022 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 1129680 4560340 ~ 4567647 (-)
G80443 NA other downstream 1622566 4064942 ~ 4066017 (-)
G80399 NA other downstream 1782343 3904067 ~ 3906240 (-)
G80271 NA other downstream 1964976 3719433 ~ 3723607 (-)
CI01000013_07339918_07367774 NA other upstream 1647781 7339709 ~ 7367774 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 3615108 9307036 ~ 9336077 (-)
G85170 NA other upstream 4787933 10479861 ~ 10480700 (-)

Expression


Co-expression Network