CI01000013_04561253_04567647 (MAP2K1)


Basic Information

Item Value
gene id CI01000013_04561253_04567647
gene name MAP2K1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4560340 ~ 4567647 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_04561253_04567647.mRNA
AACAAATCTGGAAGCTTTGCAGAAGAAGCTAGAGGAACTGGAGCTGGATGAGCAGCAGAAGAAACGCCTGGAAGCTTTCCTCACCCAAAAGCAGAAGGTTGGAGAGTTAAAAGATGATGACTTTGAGAAGATTTGTGAGTTGGGTGCAGGCAATGGAGGAGTGGTCTTCAAGGTCTTACACAGACCCTCAGGCTTCATCATGGCCAGGAAGTTGATCCACCTAGAGATCAAGCCAGCAATAAGGAATCAGATCATCAGAGAGCTGCAGGTGCTGCATGAATGTAACTCTCCCTACATAGTGGGCTTCTACGGGGCTTTCTACAGTGATGGAGAGATCAGCATCTGTATGGAGAACATGGATGGCGGCTCCCTCGATCAGTCCCTGAAGAAAGCAGGCAAGATCCCAGAACAAATACTGGGCAAAGTTAGCATTGCGGTGATAAAAGGCCTGTCCTACCTGCGGGAGAAACACAAGATCATGCACAGAGATGTAAAACCATCCAACATCCTGGTGAACTCACGTGGTGAGATCAAGTTGTGTGACTTTGGTGTTAGTGGACAGCTCATTGACTCCATGGCCAATTCGTTTGTGGGCACCAGGTCCTATATGTCTCCCGAACGCCTTCAAGGGACTCACTACTCTGTCCAGTCTGACATATGGAGCATGGGTCTCTCTCTGGTGGAGATGGCCATCGGACGCTTCCCTATCCCACCACCTGATGCCAAGGAGCTGGAGCAAATCTTTGGTCAGCCCCTCGAGGGGGACCCCTCCGCCAGCGAGGCCTCCCCTAAACCCAGGCCCCCTGGTCGACCCGGCAGCTCATACGGTCCAGACAGCAGACCTCCCATGGCTATATTCGAGCTGCTTGACTATATTGTCAATGAGCCACCTCCTAAGCTACCAAGCATCTTTGGTGCAGAATTTCAAGACTTTGTTAACAAATGTTTAATCAAAAATCCAGCAGAAAGAGCAGACCTCAAGCAATTGATGGTCCATCCCTTCATAAAGAACTCAGAGGCAGAGGAGGTTGACTTTGCTGGATGGCTATGCAGCACTATTGGGCTAAACCAGCCAGCAACTCCAACTCACAGTGTGGGAATGTGAGAGCAGCCATCTTTTTCTAAGCCAACCATTTAATGTTCCTTCACACGCAACATCTCCAGTTCTACCCTGAGGCAAACAGCTGCCTCCTGAATCTACCCCATCTTATTTTAGATGTTGTCTTGAGTATTAACATGCATACTGCTGTAATTAACAACGCATCAAACCTCTGATACAGCGCTTGAAATCCGTTCTGCCAAATATTGGTTTGATACTTTTTATGACAAAATCTAAGTGTAATTTTGATTGCAAAAGCTATCAAAAAGCTGATACTACACTGCGCAGAAACTTAAATGCAAAGGATCCCCCCTTCTAAATGTCAACCTTTTTTTACATTTTCAGCTACCCCTGAAGTGGTTACATCATTTCATTGTTATAATTTGTGTTCTGCTTTATTTCAGTATGGTGAATGTGCAGTCTTTAACTCACAAAGTGAGAGAAAATCAGTCATTTAACTTATACAAACTTGTATATTATAATAAGAGATTTATTTAACAAATGACAACTTATGGAATGTGGCAGTGCTTAAGTGGTATGCAGTGGATTAAA

Function

symbol description
map2k1 Predicted to enable MAP kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Is expressed in cardiac ventricle. Human ortholog(s) of this gene implicated in carcinoma (multiple); cardiofaciocutaneous syndrome 3; high grade glioma; and melorheostosis. Orthologous to human MAP2K1 (mitogen-activated protein kinase kinase 1).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K04368 MAP2K1, MEK1; mitogen-activated protein kinase kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_04561253_04567647.mRNA False 1651 mRNA 0.45 10 4560707 4567647

Neighbor

gene id symbol gene type direction distance location
CI01000013_04550541_04556315 ZWILCH coding downstream 4392 4550541 ~ 4556315 (-)
CI01000013_04458279_04460146 NA coding downstream 100557 4458085 ~ 4460150 (-)
CI01000013_04438907_04455220 NA coding downstream 105184 4438635 ~ 4455523 (-)
CI01000013_04412468_04417725 SMAD6 coding downstream 141843 4412200 ~ 4418864 (-)
CI01000013_04368048_04369323 SMAD3 coding downstream 191345 4366932 ~ 4369362 (-)
CI01000013_04639632_04646082 NA coding upstream 71715 4639362 ~ 4647001 (-)
CI01000013_04710817_04715966 RAB11B.1.S, RAB25, RAB11B.2.L, RAB11B.2, RAB11B.1, RAB11A, RAB11B, RAB11BA coding upstream 142908 4710555 ~ 4716196 (-)
CI01000013_04760408_04771970 SLC24A1 coding upstream 192745 4760392 ~ 4772789 (-)
CI01000013_04781357_04784880 HACD3 coding upstream 213517 4781164 ~ 4784880 (-)
CI01000013_04824249_04836061 ARIH1 coding upstream 256259 4823906 ~ 4836061 (-)
G80740 NA non-coding downstream 146561 4413320 ~ 4414146 (-)
G80761 NA non-coding downstream 150644 4409807 ~ 4410063 (-)
G80748 NA non-coding downstream 162188 4398294 ~ 4398519 (-)
G80743 NA non-coding downstream 182439 4378051 ~ 4378268 (-)
G80989 NA non-coding upstream 15580 4583227 ~ 4662653 (-)
G81045 NA non-coding upstream 154316 4721963 ~ 4728706 (-)
G81075 NA non-coding upstream 222822 4790469 ~ 4791040 (-)
G81076 NA non-coding upstream 225157 4792804 ~ 4793768 (-)
G81077 NA non-coding upstream 229918 4797565 ~ 4797921 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 1804 4560340 ~ 4567647 (-)
G80443 NA other downstream 494690 4064942 ~ 4066017 (-)
G80399 NA other downstream 654467 3904067 ~ 3906240 (-)
G80271 NA other downstream 837100 3719433 ~ 3723607 (-)
G80262 NA other downstream 993170 3565171 ~ 3567537 (-)
G81032 NA other upstream 181162 4748809 ~ 4750561 (-)
G81547 NA other upstream 1171879 5739526 ~ 5744038 (-)
CI01000013_05883498_05884071 CHTF8 other upstream 1314402 5882049 ~ 5884071 (-)
CI01000013_07339918_07367774 NA other upstream 2772062 7339709 ~ 7367774 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 4739389 9307036 ~ 9336077 (-)
G79690 NA other downstream 1741476 2813247 ~ 2815392 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012757 map2k1 coding NC_007129.7 CM002902.2 19419120 ~ 19451165 (+)