CI01000013_04550541_04556315 (ZWILCH)


Basic Information

Item Value
gene id CI01000013_04550541_04556315
gene name ZWILCH
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4550541 ~ 4556315 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_04550541_04556315.mRNA
ATGGGGTCCAAAATAGTTTCAGACGCCAACGCTTTTGTAAAATTTCTCAAGTTGTGTCAAGATGAAAGTAAAGACAACTGCACGTATATGGATGATATTTCAGTACTGCTGGTGGAGAAGGAAGAACTTTTGCACGACATAATCAGTGGAAATCAGCCTATCTTTGTCTGTGAGAAAACACAACCAAAGTGTGAAGCAGAATCTACAGAAACTACAGCTGACACCAGTGTTGTTGAAGAGATACTTTATAAAGTGGAACAAGATCTGGGGCCTCAGCCTCTCTCGGTCATGAAAGCAAGGCAGCTGCTGTCGTGGTACACCATGGCTCATAACCCCAACATGCCCCGAGTGGAAGTCTCAGGGCCTCTGCACCCTCTCTGGGTGCGTTGTGACAAGTCAGACCCATGTGCTACTGCCTGGCTTGGAGTAGAAACCTTCTACAGTGGGAACAAAACCAGTGGTGTCAAACTGTATACAGTCTGCTGCAAAGGTCCAACAGGAAATGAAACCTCTTTCACCACATTGGATGAGCTTAAACAAGAGCATCAGAATAGACACCATCCTTCTACAGTGGTGACAAAAGGCTATGCACAGTTTAACATGTTTTGCTCCTTGAAAGAGGAGAGCATGATGTTTGAGTCTCAAAGCAGTGTTATAGCGAGTTTGACATGGAACAATGTGGAGAAAGTCTTGGAGTGTCCTCCCTTATCTTCTAAAGCAACTCTGAATATCAAAGTTGCAGTTGGAGACATAAGAAGTCCATTGTATCAGACCCACAGAGAGATGGAGTTCCTTCTGGCTCTGGCAGAGGGTTTGAGAACAGGAGAAACTGAATGGTTGGAACCAATGGAGACTCAGTCTGCAGTGGACCTGACCAGAGCACTCATAGAGGGTGTAACTTCGTATCAAGACATAACAGAATGCCTGAAAATTGTTGTCAAAGCAGTGAAACTTGGTAAAATCAAACCATGGATCCACAAAGACAGCAGTAGCACTCTCAGTAAGCTGATCCTGCAGTCGTACCAGCAGCAGATCGACACCATGCCTCTCACTGGCCTCACACCCGCTAATATGCTGCTAGAGTTGGGCCTGGACAAGATCAGGAAAGACTTCATCAACTATCTTGTTGGAAAGGAACTTACAACTCTCAACTATTTGAGTTACTACTTGGACACAGAGGTGGACCTGCAGGAGCAGGTGATAAGAGTGAGGAAACTGCACCACCTGCTGGAGATCCTGGGCACCTGCAGTACTTTCCTCAGTCTTCCTCATGACCGCCTTTTCCTTTTCACTCAGTCCTGTTTGCAGTACTATAAAACATCCAACTATGATGAGGACCACGTCTTCCAGTTGCAAATTAAGCCTGCCCTCATTAGCTACTTTTATGAAAAGGAGCAGCCATTCTCTTGGGGCATGGATGTGTCCAGTGGACAGGGGTCTAAGGAAGTCAAGACAGCATTGTACCTCAGTGACAAGCCCCTAGTAGACCACATCAGTTTTGACTTAGATGTGCCCCTGGATGAGTCTGTCAATGGAGAGTGTGAGAAGATGTCTTACTACAGGACCATG

Function

symbol description
zwilch Predicted to be involved in mitotic spindle assembly checkpoint signaling and protein localization to kinetochore. Predicted to act upstream of or within cell division. Predicted to be located in kinetochore. Predicted to be part of RZZ complex. Orthologous to human ZWILCH (zwilch kinetochore protein).

NR:

description
Si:ch211-242m18.4 protein, partial

GO:

id name namespace
GO:1990423 RZZ complex cellular_component

KEGG:

id description
K11579 ZWILCH; protein zwilch

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_04550541_04556315.mRNA True 1569 mRNA 0.46 16 4550541 4556315

Neighbor

gene id symbol gene type direction distance location
CI01000013_04458279_04460146 NA coding downstream 90391 4458085 ~ 4460150 (-)
CI01000013_04438907_04455220 NA coding downstream 95018 4438635 ~ 4455523 (-)
CI01000013_04412468_04417725 SMAD6 coding downstream 131677 4412200 ~ 4418864 (-)
CI01000013_04368048_04369323 SMAD3 coding downstream 181179 4366932 ~ 4369362 (-)
CI01000013_04350678_04363643 SMAD3B, SMAD3 coding downstream 186852 4349830 ~ 4363689 (-)
CI01000013_04561253_04567647 MAP2K1 coding upstream 4392 4560340 ~ 4567647 (-)
CI01000013_04639632_04646082 NA coding upstream 83047 4639362 ~ 4647001 (-)
CI01000013_04710817_04715966 RAB11B.1.S, RAB25, RAB11B.2.L, RAB11B.2, RAB11B.1, RAB11A, RAB11B, RAB11BA coding upstream 154240 4710555 ~ 4716196 (-)
CI01000013_04760408_04771970 SLC24A1 coding upstream 204077 4760392 ~ 4772789 (-)
CI01000013_04781357_04784880 HACD3 coding upstream 224849 4781164 ~ 4784880 (-)
G80740 NA non-coding downstream 136395 4413320 ~ 4414146 (-)
G80761 NA non-coding downstream 140478 4409807 ~ 4410063 (-)
G80748 NA non-coding downstream 152022 4398294 ~ 4398519 (-)
G80743 NA non-coding downstream 172273 4378051 ~ 4378268 (-)
G80989 NA non-coding upstream 26912 4583227 ~ 4662653 (-)
G81045 NA non-coding upstream 165648 4721963 ~ 4728706 (-)
G81075 NA non-coding upstream 234154 4790469 ~ 4791040 (-)
G81076 NA non-coding upstream 236489 4792804 ~ 4793768 (-)
G80443 NA other downstream 484524 4064942 ~ 4066017 (-)
G80399 NA other downstream 644301 3904067 ~ 3906240 (-)
G80271 NA other downstream 826934 3719433 ~ 3723607 (-)
G80262 NA other downstream 983004 3565171 ~ 3567537 (-)
G79690 NA other downstream 1735149 2813247 ~ 2815392 (-)
G81032 NA other upstream 192494 4748809 ~ 4750561 (-)
G81547 NA other upstream 1183211 5739526 ~ 5744038 (-)
CI01000013_05883498_05884071 CHTF8 other upstream 1325734 5882049 ~ 5884071 (-)
CI01000013_07339918_07367774 NA other upstream 2783394 7339709 ~ 7367774 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location