CI01000013_10838711_10841053


Basic Information

Item Value
gene id CI01000013_10838711_10841053
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10838497 ~ 10841564 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_10838711_10841053.mRNA
ATATGTCATATTTACATAATATATTGTAAGTAAGGTAATGCACTATTCAAAACATTTCTAAATATTTCTCAATACAAATTTGAGTAATGTACCAGTTCAAAAATTAAGAAATAGAATATAAACATGAATGTATATAAATGATATTGTAATCAAGCATCATCAGTTCCCAAAATGGTTCAAGTGATGTGTAATTCAGTAGACTGAACAGAGTGGCCCACCAGATTTTGTTTCCTGTTCAGCGATTCCTTAAAATAGCTCTACTGCGATTGCTCTGGCACACAGGCGCCATATTGAGCCTTGAAAACAACCATGCATGATCTATCAAAAAACAGGCTGGATTTATCCTCCATCCACCATGGAATGACATGTCCTTGGCTGGGATTGTGAGTCAGACTTTTTAGACTAATCATTGACTAGAATAATTCCAAATGCAAAAGTCAAATTGCAGTTGAAGAGGTATACAAAACCTGTAAATCCTACAACTACCAGAGTATTCTACCTAAATGGGAACATGGCTAATCTATGGCAGATTATAGTTGTGGCTTTAATGTATTTTTACACATGGCTTAAAAGACATTTAAAAGAGATACAGAGGTGTTTGTGCTTTAAAAGTAGTTTAAACTGGGTTCAGTTTGGACAAGCAGATTCTGGTGTTGTTGAAGAGAAGTCTGATAACCTACAGTCAGACGTTTGGAGAACAAATCAAGACTACAGAACCTATCGGCACCAGAGCAATGGACCAATGGTTATGGTGCAAACCAGCACGCATACTTTCCATGTGGATCTGGAGAAGCTTGCAGACTGCAGCGAGTATTTCAAGGCTCTGTCCCACTCCTCCATGAGAGAGACATCTGAAGGGCTGGTGCACCTTGAACATGTTCCCTCTTCAGTCTTTCACAGCCTTCTAGAATTCTGCTTCCTACAGCGGTTTTGTGTTCCTGAAGATCTCCTTGGGGAACACCTACGGGTGAGCACCTACCTGTTGGCTTCCGGGTTCACAGATCGCCTACTGATTGCCCTCTCTCAGGCCCTGACGGAGTGCACCTGCTTGGGCTATCTACAGCTGGCTGAGGAACTCTGCAGTGAGGAGCTCAGAGAGACTGTGCTAACCTACCTGAGCAAGTATCTACTGGAGCGTCCACACCTGAGCAAGGGCTTGGAGCCACAACATAAAAAGGAGCTTCTCGAATTAAGGTCAAAAGGAAGTCCACACTTATGCTGCTTGAGAAAAGAGAACTTGACCTCAAGGAATGACCTGGAAACAGAGGCTGCTCGAAGCCTCTTCAGACTGGAGGGAGAAGGGGATGATGGGAAATGGAGTTCTCCCACAGATTTGCCTTTTTGTGCAGATAAGTGGTGCTTCACCACAGCGGTTCTCTATAATTACCTCTATATCATAGGGGGTTATAGACACCGTGTAAAGAAGGGTTACGAATTCAAGATGGCTTCTTTCCGGTACAACCCTTTTACCAATCAATGGGTATCGACAGCTCCTCTGATTAAGCACAGGCGTCACTTCAGTGCAGCAGTGTGTGAAGGGAGAATCTTTGCTGTGGGCGGCTGGTATCTCGATTCCCTTGTGACTCCTGACTCCAGCACCGGTATCTACACTGCTGTGGAGAGGTATGATCCATGGACAGACACCTGGGCATTTGTTTCCTCCCTCCCTCTGACGGACTTCCAGTTCAGCTTGTCCCTTTCCCATGATTCCCCACTCACAACCAGCCTGGGACACTGCCTCTATGTACTGGGGAACATCCAGAGAACCGGAGAGAAACTGGTGCTGCGCTATGATTCTAGACAAGATTGCTGGTGTGAACTGCTCCCCACTCTAACCCGCTCAAATGCAGAGCTCCCTATCTTGCACTTCCTGGGTGCTATCAAAAGTCAGTTGGTTGTAATTGGTGGGAACAATTCTAAAACCATGGTGACATCTTTCTGCGTGGACTCTCAGAAGTGGGGCTGTGTCAGAGCAATGGAGAAGACCAGTTTAATCGGCCAGGGCACCATTCTGCATAACGAAGTCTACATGTCAGGGATGAAGGACAATTCTGTAGTTAAACTGAACCTGCATTCCCTGTCTCTCTGTCCTCTTCCTTCACTTCCTGTCTCTACCTGCTATGAGAGCATTTTCCACCTCTACTTCTGATCTTCTGTTTTCTTGCTGTTAAAACTGCAACAAAATATAGCAACAATATATCTCAGATTCACAAAATGTATCAACTTGTCTGAAGTAAAGCATGTTGAGAAAACTTGTTATTGTGGCATAATCTTTCTTTGTGATAATTACAGTTTGCACAGTACACAATTAGTGCTGCTTGCTAAGACATGACTATTAATTTTTGTACATATTTTGGATTAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_10838711_10841053.mRNA True 2363 mRNA 0.44 4 10838497 10841564

Neighbor

gene id symbol gene type direction distance location
CI01000013_10828622_10836409 CPT1, CPT1B coding downstream 1351 10828531 ~ 10837146 (-)
CI01000013_10799938_10806858 PRPF18 coding downstream 31639 10798598 ~ 10806858 (-)
CI01000013_10597504_10610862 IMPDH1B, IMPDH1, IMPDH1A coding downstream 227635 10597504 ~ 10610862 (-)
CI01000013_10564288_10569141 NA coding downstream 269207 10563459 ~ 10569290 (-)
CI01000013_10560692_10562065 NA coding downstream 276217 10560297 ~ 10562280 (-)
CI01000013_10843295_10852581 CHKB coding upstream 1596 10843160 ~ 10852581 (-)
CI01000013_10892125_10899628 ARSA coding upstream 50150 10891714 ~ 10899628 (-)
CI01000013_11262983_11266454 RABL2B coding upstream 420911 11262475 ~ 11266454 (-)
CI01000013_11276658_11278225 NA coding upstream 435070 11276634 ~ 11278730 (-)
CI01000013_11280259_11284882 NA coding upstream 438620 11280184 ~ 11284882 (-)
G85311 NA non-coding downstream 62284 10773780 ~ 10776213 (-)
G85262 NA non-coding downstream 78010 10756812 ~ 10760487 (-)
G85201 NA non-coding downstream 153934 10621530 ~ 10684563 (-)
G85196 NA non-coding downstream 251367 10586371 ~ 10587130 (-)
G85190 NA non-coding downstream 287227 10550928 ~ 10551270 (-)
G85343 NA non-coding upstream 58923 10900487 ~ 10900711 (-)
G85345 NA non-coding upstream 94817 10936381 ~ 10936656 (-)
G85346 NA non-coding upstream 97778 10939342 ~ 10939904 (-)
G85347 NA non-coding upstream 98996 10940560 ~ 10940887 (-)
G85348 NA non-coding upstream 99517 10941081 ~ 10941502 (-)
G85188 NA other downstream 243160 10592204 ~ 10595337 (-)
G85170 NA other downstream 357797 10479861 ~ 10480700 (-)
CI01000013_09309438_09335834 MICAL3A other downstream 1515653 9307036 ~ 9336077 (-)
CI01000013_07339918_07367774 NA other downstream 3456137 7339709 ~ 7367774 (-)
G85401 NA other upstream 193468 11035032 ~ 11035466 (-)
CI01000013_11596784_11604320 NA other upstream 757496 11596688 ~ 11604865 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location