G85454


Basic Information

Item Value
gene id G85454
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11770749 ~ 11775434 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU97247
ATGTTTTGTAATATTTTTAATAAACTTAGAAAAATATACACTGGCACAAGTGCCATTATTTTCAAAGAAATACAGCCTCACAGTTTAAATTTTTACCTTCAATCTATATGAATATAAGTCTAATATAGTAATAACAATGAATACATAAGATAAAGTCTTGGATATTAATAATTAATATTTCTCTATTTCATGTTGTTGGTAAATATAGGTATATGAATTGATTTATTTTATATCATGGAATTAAATCTGGATTTTTATATTTTATTTGACATTTTCTGAAGAAACTTCCAAAGTGATAAGGTGTCATGGGTGTTTGCTAATTGGCGAAAGTCAAAAGAGTCAGCATGATATTCAGTGTCTAGAATTATGTAGAATTCTGGTAAACATTCACCACTGCAGTACCCCGGGGCAGTACTTATCAATGAGAGTCTGATAATATGGCCTCAGACTCTCCACGTCCGGTAGTTCAGTGCTCTTGGTGTACAAATCGAACTTGCTGTCAGAGGAAAGACAAACAGACACATGTTATTGATCTACCTCTAGAAACTCGCAGAGTAAGGTCAGAACTTCAATATGTGGGTCACACAACTGATTAAATGGAAACGCCGATGAACTCTTATTGAGAAACTGATGACATACTTAAACTCTTTGACCCAGGGAAGCATCTGCAGGTCTTTATCGTTGCATAAGTGCATGTAGTCTCCGTTTGAGTGCCAGGGGTAGAAGGAGTGGAAGCGGATCATGTAAAGACCCTGAAGGAATTTGGGAGTGTTAAATGTACAAAGTGTCTTATAAAATCATACATGACATCATATTGTTTGTGTGTGTTAGATTTGTTTGCTTTCAGGTGAGCACTGTGACGTTACCTCCTCAGGGATGGTGCATTTGTTGAACTTCATTACCTGGTACAGATACTCTAGAATAGTGCAAGAAGAAAGTCTCTTATGCTCACAAAGCTGACATTTATTTGATCAAAAATACAGTACAATTGTAAAAATATCTATTTGAATTCATTTTAAAATTTTCAGCATGATTACTGATGGTCTTCAGTGTCACATGATCCTTCAGAAATCTATTTTGCTGATTTGGTGCCCAAGAAACATTTCTTAAATGTTTAAAACAGTTGTGCTGCTTATTTTGTGGAAACTGGTCTTTTTTTTTTTTCTTTTTTTTTTCTGGATTCTTTTTTTGATGAATATAAAGTTCAAAAGAATTTATTTGAAATAGAAATCTTTTATATATTAAATCTTTTGGAATCTCACGATTTGATTCAAATCAATTATTGGGGTCATGATTGGTTTAAAAATCTGTTCTCAATTTTGAATCGAATTTCAATTCAATATATGCATAGATTTGATATTAGATTTGATTCTAAACTTTACATTTTCATTTATTTTAACTAAAATCAAAATGAAACTGAAAATAAATTTTAGATCACCCCCTTATATATCTTATACCCTTTGCATTACTTCATCAATCAATTTATAATACCTAAATATTTTATATCAAACTATTTTATTCATATTTCCTGCCTTTTAATTTTTTAGGATATAGGTAATACTAGGTATATCGTTTATATTTGTTTCTCTGGTACAGTTTTGCCATGTCTTATTATTTTGTGTTCTTAAGGGGCTTGTTTTGCCTTTTTTTTTTTTTTTTTTTTTTTTTGATACCTGGCAACCCTTCACCTTGAGTTTTAATGAAGAGAGGGAAGAGTTTAGAAATGAGTACAAGGAGAACTACTGCTGATTGATCAGGAGTTATTTTAAAAAGTAATTTTTTATACACACCTCGTAACCATGATATTATTTTACACAAGCCCAATGAAAACTGACATGCCCACGTCTTTTGTATCGTTAAAATGTGATCAGTTTATGAGCGTCAAGTTGAGATGTATCGAATCAAAGGAAGTGATTGTCAGCCGGTTCCAATCAGTGTCTGATCGTTCGGAGTTAGTAAAATATAATGCGGGCTGTTGCATTCTCAATATTTAGTGATTTACCCTCAGATACAGAATATGTTCATTGGCTTTACAAGCAGGTATTGACATCTTCCTGCGCCCCTGGTCTTCCCTGTCACTTTTGATCAATTTAATGTGTATTTTGTGAATAAAACTTAAAAACAGAAAAAACCCTCAATGGAATAGTGTGTGTTTCGCAATGAGAATTTAGATGCAATATCATTATGGTCATGTGTGTAAAGATCCTCCAAATCACTCACCATCATGTCCCCAAGACATCAGGACATTATCAAGCCCACATTGTGGTTTATAGATCCCAAATTCTGTGCTGCATTGAGGGAAATATGTAAACTACATCATCAGAATCCATTGAACATTTTATTTCTATATAGAAACTAAATGGAAATATTTAGAACTAAATATAAAATATAATTATGCAAATAATAAAATAATATATATAATAAAAAATATATTTAAAAAAAATACTTATAAAACTAAAATAAAAATGACAAGTGAATAAGAAAATAAAGTTTAAAAGTTTAATTAAAATTAAACGATCAAATTATTATTAAACACTATAATATTATATAAATAATACTGATCAGGAAACACGTTTTGATATTTAGAAGGTATCAGTGTATTTGTGTTTTGGAAAAAGGTGTGATGTACTTGAGTGTAGGGTTCTTCACATCCGGATTGCCTTCAAATGTGGAGTTTCTGAACACTATTGAATTCTGGAACTTGCATCCCACTGGGAATGTGTCTCCAACTACAGCCCACTGAAACCCACGAAACAGCATTCTGATTGCTTATTATTTAGCCCATATGATCGTCGTAGATTTTTAGACTGTGTTTGGATGCACTTGTCTCTCACCTGTTGCTCCCCATACAGGGCCATGATTTTTCCAATGTCATGGATCAGGCCAACTAGCTGGAACCAATCTGGATACAGGTAAAAATGAGAGAAGTGCTTTTAAATTCAGTTGGAATGTTGTATTTTAACATTCGGGCAAATAAAAAAATATCCAGTAAGAACTTTCACATTTAGATATGGATTTTAGTTCTGAAAGAAGCCCCGCATGTCTGGACATATTAATCAGAAACTGAACAAAAAAACAAGAAACTATGTGTTTTTGTAAAAGACCATCTTATCTAAGTACGGTGTAGTTGATCTGTGATCTTTGTCCCTGTTGACTCCTCACCTTTATCAGGATGCTCTTTGCGGATTCCTTCGGCGGTCTGGAAAGCATGGAAAGAGTTCGGGAAGTCAACATCAGGGTCGGATTCATCAACAAGCTCGTCCAGGGAATTGATATTTTCCATCATGGTCATGCTGAAGTGATTGCAGTTCGCCCATTCCAGGTGCTAAAGGTGAGAAGTCATGTTCAGTGTTTGTTGTGAAGGATGTAATTTATCTGAGTCATCACAGAGCATCTTAAGTTTATTCTAGTTTAACTCCAACAGAGAAACACATCCGGTTGAACTAGAATTAACTTTATTATGCAAGTAAAGCTTGTTGTATTGTCTGGTTTTAATATAAAATATAACTTAAATAAGAACAGAACATAAAAATGCATGGTACATCAGAACAAAAACTCTACATATACATACATACATACATACATACATAAATACTGTATATAGTTTGCCATTCAAAGACCAACCTTTTGTTTGACAAAGTCCAGTGTTTGGTACGTGTGCATCAGCTTGTATGTATTAAACACACGGTCAAAGAGCTCTCCACTCTGTGTTAGACATGTACATACATTAAAATGCAAACAAGTGTGTCATATTAAGAGGAATTATACACAAGTTAAAAATATGCAAAATTTGCCTCAAAGTTCCTGAATTCTGCTTGGTCTTTCTCATGACATTCGGGACGATATGCCAGAGAAGGATCCGGACCCTATGAGTAAAAGTTTGTGTCAGAAATAAGACTTAAAAGACAGATACACAGTCTACCAAACCAAAGCAACAGTTTGATTGACCATTTTCAGCATTGCAAAAGTCATTCATATATATATATATATATATATATATATATAATATAAATGCTTTCAACTCAGTGAGGAAATTATGTAAGTAACTGTCTGAATGTCAGGTACATACCAGGTTCACCACCCTCATGGTTCAGTTGAGATTGTGTCGTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97247 True 4112 lncRNA 0.33 2 11770749 11775434

Neighbor

gene id symbol gene type direction distance location
CI01000013_11634008_11643242 NA coding downstream 127507 11633342 ~ 11643242 (-)
CI01000013_11596784_11604320 NA coding downstream 165884 11596688 ~ 11604865 (-)
CI01000013_11566351_11566887 NA coding downstream 203862 11566125 ~ 11566887 (-)
CI01000013_11516609_11563528 VWF coding downstream 207221 11516291 ~ 11563528 (-)
CI01000013_11480488_11512738 NA coding downstream 258011 11480488 ~ 11512738 (-)
CI01000013_11776137_11791017 LMF2A coding upstream 440 11775874 ~ 11791017 (-)
CI01000013_11794495_11842660 C2CD5 coding upstream 18648 11794082 ~ 11842675 (-)
CI01000013_11860175_11889068 NA coding upstream 84468 11859902 ~ 11890116 (-)
CI01000013_11893589_11902743 FKBP4 coding upstream 117856 11893290 ~ 11902743 (-)
CI01000013_11920663_11935058 NA coding upstream 144690 11920124 ~ 11935058 (-)
G85676 NA non-coding downstream 64285 11706125 ~ 11706464 (-)
G85661 NA non-coding downstream 87716 11681183 ~ 11683033 (-)
G85632 NA non-coding downstream 175448 11593301 ~ 11595301 (-)
G85620 NA non-coding downstream 205243 11565132 ~ 11565506 (-)
G85585 NA non-coding downstream 334596 11435862 ~ 11436153 (-)
G85481 NA non-coding upstream 72833 11848267 ~ 11851199 (-)
G85712 NA non-coding upstream 171936 11947370 ~ 11954012 (-)
G85715 NA non-coding upstream 178637 11954071 ~ 11955117 (-)
G85718 NA non-coding upstream 186004 11961438 ~ 11966326 (-)
G85769 NA non-coding upstream 340935 12116369 ~ 12116730 (-)
G85401 NA other downstream 735283 11035032 ~ 11035466 (-)
G85188 NA other downstream 1175412 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 1198309 10563459 ~ 10569290 (-)
G85170 NA other downstream 1290049 10479861 ~ 10480700 (-)

Expression


Co-expression Network