CI01000013_11970695_12013511


Basic Information

Item Value
gene id CI01000013_11970695_12013511
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11970550 ~ 12013511 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_11970695_12013511.mRNA
GCTCAAGTGTCCAGTGTAACCCCTGCAACATCATACACCGTCACGGTCAATGCAGTAGCATCGTCAGGGTTCAGCTCACCTGTCAGCCGAATACTTGTCACAACTATTGAGTCCTTGCCTGCCGCCCCTTCTAAGCCAGAAGGTGAGCGGGTTGGTTCCACTGGAATCCTGCTGTCCTGGAGGATGCCGATGCCCCTTGACCCTTCAATTCATTCATTTGTCATCAAATACAAGGAGATGTGTCCATATCCCAACCCTACCTTCACTGAGGTCATCAAGAGCCTGGACATCCCAGAAACCCTCCTGAACACACTCACTCCTGGAGCAACGTACAACATCAAGGTTGCAGCAGTAAATAAAGCAGGAACTGGACCTTTTAGCCAATCTCTGTACTACAAAACAGCAGAGGCCCCCCCTGGTCTGGTGTCAAACCTCACAGCGTTTGCTGATGATCACGCATCGGTGTTAGTGACATGGTTTCTCCCTGTACGCATTAATGGCCTTATCACTAAGTTCGCAGTGAAAGTCAAACATGCTCGAACAGGCCAGATTGTCCGCACACTGGAGCTCAAAGCAGAGGACATCATGAACGGAGCTCTGCCTCACTGCAACGATGCAGCAGACATCTTATCTCGTGGAACTCCAAGCCCATCCGAGTCTTCCCAGTTAACTTCTGCTGTGTTGCCCACGGTTACGCTCTCAGCTGTACCTCCTGCCTCCATCTGGAGTGTTCCAATCAGTGTAAAGATTGATGAGCTCCGCCCCTACACACCTTATGTGTTTGAAGTCTCCGCCTTCACTAGTGATGGGGAGGGACAGATTGCCAGCACTATGGTCCGCATGCCGGAGGCTGCCCCTGAAGACCCGCCGCAAAATGTACTTTTAAGAAACATCACTTCTAAATCTTTGTCTCTAATTTGGGACCCACCAAAGATCACCACAGGACGATTCAGTTACATCATCCAGCTCCACAGCTCTGAAGGGCTTATTAGTGAGAACAGCACAATCGATCAAGCGTTTATTTACACTGGACTGACTCCATACACACAATACTACATCCATGTGATGGCCAAATCAGCAGGGGCCACAGGACCGGCAGCAGTGGTCAACATTACAACACTGGCAGAAGCCCCGAGTGCCGTGTCTCATCTGACAGCTGAGGCTGTGGACTCCACGTCAGTTCGTCTGTCCTGGAGATCCCCGAGCCAACCGAACGGCTTGATAACCCACTATCGGATTCTAGCACTGTACCGTAGTACTCTTGTACAGGACATCACCCTAAGAGGACAGAACGCTGTGTCTCAACCACTTCGTCGCAATGCAAGGTCACTTGACATCCCCACAGCATCTACGTTCACCCTCACCTCATATGGAACATTTCTCACTTTGGGTCGCAGTTTTACCAACACTGACACGGAGCTGCCCTCTGACCTTCCTCTGACTCCAAGCACTCCCCACACGTCTCCACCCTGGCTCACAGTCACCCACGATAGAACCGATGCATCTGTTCAGGCTGAGACTGAGGCCGTAACCGAGGACCCTTTGACTGAACTTTCAGCTCTTACTCTAGGCACTGACCAACCGCCGCTGGATAACTTAAGCCCCTCCCAGCCCCGTCGCTTCACTAGGGCGGTGGCCACAGACTACACCCAGCAGCAGACAAACCTCCCAACAAGAGATGTCACTACCATTGGAATAGAAGTCCTACCAGCCATTGAGGAGGCAGCAGACCTGTCCTCTAATCAGCTCATGTATGTGGTTAGAAGACTGAGCCCTTTCACAGAGTACACATTTAGCGTGTCGGCAAAAAACATTATTGGAGAAGGACCTTCCACACAAGTTACAGTGAAAACAACTGAACAGGTGCCAAGCTCTGTTCAGAATGTGTCCTATCAGAATCTTACCTCCACCTCTATCCGTGTTAACTGGGAGCCGCCCCTCAACCCCAACGGCAAGATAACGCACTATGCTGTGTATGCACAAAATCTCCTTACAAACCATAAATTACGACAGATGACAAACACCACTACTGCAGTGCTCACAGGTCTAGACAAGCACAGCAGTTATAAGATGCGTGTGGCGGCATCTACAGCCGTGGGGGAAAGCCCTCTGACCGATGAAGACTACATCTTTGTTGTGACACTAGAGGATGAGCCAGATTCACCTCCACGGGATCTGGTCGTAGTAAAAACCACCTCCTCCACAGCTACTCTCTCCTGGTCTCCTCCAGAGAAGCCCAACGGCATCATCCACCTGTATGAGGTCTCCTACACCAACGGCACATACAGCAACACAATCAACAGCACATTACTCAGTGTCACACTGCGCTACCTGAAGCCGTACACACACTACAATGTGACTGTCCGTGCGTTTACGCTGCATGGACACGGGAACCAGATTTCTGATACTCTACAGATGTTGTCAGGGGAGGATGTGCCTGGCAGCCCACCTTACGATTTGACCTACGAGAGCATCGGATCCAGCGAGGTGAACGTGTCGTGGGTGCCCCCGCTTCTCGCAAACGGCATCATTCTTTTCTACAACGTGGAATACTGGAACGCCACACACAGTCTGAACCAAACCACACATGTGCCTTATGTTGTCCTGTCCAACCTGCGAAAGTATGCGCGCTACCGCATCATCGTGCAGGCTGCCACACAGGTCGGCATGGGCAACTACACGAGCGAGATCCTGAACGTCACCACACTGGAAGACGTACCCAGTTCCCCTCCAAAATTCCTAATTGCCAGGAAATTGTCAGATACTGAGGTAGAGTTGTCCTGGAAACCTCCCGAGGAGGCCAACTCTGAAATTTTATTCTACATAGTGAGAGTGTGGAATCTGAGCTCTGAGTTTGTTGCCAATGTGACGGGAACATCAGTGGTGGTCAGTGTGGAGGGGCTGGGCCAGTATAATGCCTCCGTCAGCAGCTGGACTCGACTCGGAGATGGAGGGATACTGATTTACATCACGTTCAGTACCGTAGAATCAGCCCCATCTGACCCTCCACAGAATGTATTATACACACTGCTTACGACCACTACAGTGCATCTCAGCTGGAGTCCTCCAAATGAACCCAACGGCATCATCCAATACTACACTATCTACTACACAGATAATTATACAGAGTATACAAAGATGGTTCCGGGTTCAGAGCAGTGGCTGGTGTTGTCTGATCTGATGGCAGGACAGGAGTACAGTGTATGGATGAGTTCCAGCACTTCTGTTGGTGATGGGGGAGTGTTCAGTCCCCGTCTAAACTTCACCACATTAGAGGACGTGCCGAGTGGTCCGGTCCACAACCTCACCGCTACCATCTATAGCTCTACGGCTGTAGTGATCAGCTGGGACCCCCCTCTGGAGCCCAACGGCAAAGTCTTCTACCAGCTGAGCTTGCAAGAGGCGGGAACGACCCACCCGTCCATCAACCGCACAGTCAACATCACCATCTCCAAGACAACCACAGACAACATCTACCTCTTCACCAAGCTCAGAAAGTATTTTCCCTACATCATAAAAGTCACCCCAGCAACCAGTGCGGGATCAGCTGTAAACCACACTGCAACCCACCACCTTCGAACAGATGAAGACGGTGCTCATCACTTCCTGTATTTTACATGCACATTCCCAAGTTCTCCTCCATTGCCTGGAGCTAGTAGAAATCTCTCCAGCACCTCCATCCATGTGTCGTGGTTCCCCCCAGTGGAGGCCAATGGCGAGATTATAGAATACGCTGCAGTTTTACAGGGTCCTGGGGCCGTCAACAGAACCTACACCTCTGAAACACACCTAATTCTCTCAGAACTCACTCCATTTACACCTTACAATCTCTCCATCGCTGCGGTTACTCGCCAAGGTGTCGGCCCCTCCGTGATTATTCCACTACATACTGATGAAGCAGGTCCAATGTCTCCACCACGCAATCTGAGTATTTTTAACCACACTGCGTATTCAGTATGGATTCACTGGGAACCTAGTCCGGAGCCAAATGGAATCGTCCAGCACTACGGATTCAGAATACTGGAACTGAACACAGACACTTTCAGATATCAGAACTCATCAGATGCGTCTACACAAGCAGAACTGAGTGGCTTCAGACCTCATAATTCATATGAAATCAGTGTGTGCACATTCACTAGAGCAGGAAATGGGGATCAGTACAGCCTGCCTGTAATATTTACCACCAATGAATCAGTGTCAGATGCAGTTGGAAATCTGTCCTGCTCTGGATTGGATTGGAATTCAGTGTACATGGAATGGGAGCTTCCGATTCATCCTAATGGAGAGATTCTGCACTACCTCATTCGCTCTGGAAATCTGGAGGAAGAGGCCCATCCTCTCACACTCACATACACAGTGGCGCACACTTTCACTGGCCTGTCGCCTGACGTTTTTTATGTTATCAGCGTGGCTGCAGTTAATTCAGCCGGAATAGGGGAGGAAGCCAACTGCACCGCACACACTCCATCAGAGTCAGTTCCTGGTCCCCCCGAGTCACTGACCACAACGGACGTTACCTCTGACAGTGTGTCTCTAAGCTGGCGACGTCCCGTCCATGTTCCTGGTCTTCTACAGGGTTATAATGTAGAGATTAAGCAATTGGCAAGAAATTGTGATCAAAAGGAGCACGTGGAGTCATGCGTGGAGAGTGAACGTGTGGAGTGGGTTGAAGGAGAAACCAGCAGAGTCACACTTTCCCCTCTGCTCAAATATAGAGAGTATCATATGAGAGTGGTGGCGTTCACCAGGGCTGGGGCCGGAGAACCCTCTGAGTGGATCCACACACAGACGCTCGCAGGAAACCCTGATGCCCCTCCTGGTACCATCTCAGTGTTTCCTTCTGCCACTGGATTAAAGATTGAGTGGGATGAACCATCGGTCATCTCAGGGCCCACCTCATACATCATTGACATCACTGCTTTGGACAGTTCGGGATATAACATTAGCTTAGTGCGGCATTCAGAGGAGATCAGGGCGGTGGTTGTCGGGAACCTGACTGCATTTACCCTGTACTCTATTACCATCACCGCCTTCACGGGGCAGCTTTCCAACGCTCACAGAGACGGCAAAATATCAGAACCCGTACTCGCCAGAACCCTGGAGGATGAGCCCAAAGATCCTCCCAAAAATTTGACATTGACAGTGATTCCTGAGGAAGTGACACGTGTTTATGTAACATTCTCTCCACCGGATGAGCCGAACGGAAACATCAGTTCCTACCATGTCGCCATCTACCGCAACGGACAACTGGATTTTTACATCAACAGCCTGCCTGTGATCAGCAACCCTAATAATACCATGACGGCCATTATAGATGGACTGAAGGGTGGATTCAATTACAGCATAAGGATAGCAGCCGTGAATGGAGCAGGTTTAGGGCCAAGTTCAGAGGTTCGGATCACCACCGGTGTGAAAGCACCACCCAAGCCAACAAGGAAGCCACGGGCTGCTCTGAACAATGCAGGTGTCGTCATCTCAACCTCCAAGACCATCACCATCGAGATGCCTGAATGTTTCTTCACTGATGACCATGGACCAATCCAAAAAGTCCAGGTCATAGTTTCTGAACCAGCAGTGATGGACTACGGTAATCTATCCAACTGGAAGAGTGTTTTCCACCAACCTACCGCTCCGTACCTGACCGACGAGGGCTTCTTGAACCCAGGCTGCTCTGAGAAATCAGAGCGCATGAGCACAAACACTAACACATACATCATAGGAGCAGACGAGGGCTGCCTTTCTGAAGATGCCAAGACTCTTTGTAATGGACCCCTCAAGCCCAAAACACATTATGTGTTCAAATTTCGGGCAACAAACATCCGTGGGCAGTACACAGACTCTGAGTACTCAGAGAGGGTCAGAACAGCAGGGGTTCAACAACAGAGTCAAATAGTATTTCCCAAAAAGCTTCAGTTTTTTCTTGGTTTAACAACTAGACTCACTCTCTTCGATCCTAGGATTCACCGCAGGCAGAAGGAAGGTGGGACGTACTCTCCACGCGAGGCTGAGATTATCGAGACAAAGTTCAAGCTGGATCAGCTCATTGCAGTGGCCGACTTGGAGCTCAAAGAGGACAAGATTAACCGAAGGAAGGAGATTTTTGTCATCCAGCCAATCAGTAAGAAATCATTTCTTCAGCATGTGGAAGATCTTTGTGCCAACGACAATGCCAAGTTTCAGGAGGAGTTTGCTGAGTTGCCGAAGTTGCTTCAGGATCTGGCCACATCAGACGCTGACCTTCCCTGGAATCGCTCCAAAAATCGCTTCACAAACATTAAACCCTATAACAATAACCGAGTGAAGTTACTCTCTGAGCCAGGAATGCCGGGGTCTGATTACATCAATGCCAGCTTCGTCTCTGGCTATCTGTGTCCTAATGAGTTTATAGCTACTCAGGGTCCTCTGCCTAGTACCGTCGCAGACTTCTGGAGGATGATTTGGGAGACGGGGACCAAAACCATTGTCATGCTCACTCAATGCTTTGAGAAGGGCAGGATCCGTTGCCATCAGTACTGGCCAGAGGACAATAAACCAGTCACTGTTTTTGCTGACATCATAATCACTAAACTCACAGAGGACGTGCGCCCTGATTGGACGGTCCGGGCACTCAGAGTGGAGAGGCATGGCAACTACATGATTGTTCATCATTTCAACTACACCTCATGGCCAGAACACGGCGTTCCGGAGTCCAGCTCCACACTCATCCAGTTTGTCAAAGCGGTCCGCTCCAACAGAGCCCATGACAACACAACCATCGTGGTCCACTGCAGTGCTGGTGTGGGCAGGACTGGGGTGTTTATAGCCCTCGATCATCTCATTCAGCATATGAGGGATCATGACTTTGTGGATATATATGGCCTGGTCGCAGAACTGCGCAGTGAGAGGATGTGCATGGTGCAAAACCTGGCTCAGTACATGTTTCTGCATCAAAGCACTCTGGATCTGCTGTCCGCAAAAGGAAACAGTCAGTCCATATGGTTTGTAAATTACTCCGCTCTGGAGAAGATGGACTCGCTGGATGCGATGGAGGGTAAAATATATCCTACAATCAGTGACTTGTACACTATGGAGCTCAATTTCGTAGACATCCCAGAGTGCAAGGACTGTCATTCTCTGTATGGTTGCTTTGAAGAGTGAGAGAGCATCCGGTGTGAAAGCAGCAATTCAGGACCCTGGAGAGCAGCACTAAAGCTTGCTGTCGAAACAAAGGGATGCTGGGAGAACACAAGGTCCTATATTGAGAGGACTGTTCAGGTATAGGGGATGTTTGGGGTACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_11970695_12013511.mRNA True 7282 mRNA 0.50 42 11970550 12013511

Neighbor

gene id symbol gene type direction distance location
CI01000013_11920663_11935058 NA coding downstream 35492 11920124 ~ 11935058 (-)
CI01000013_11893589_11902743 FKBP4 coding downstream 67807 11893290 ~ 11902743 (-)
CI01000013_11860175_11889068 NA coding downstream 80434 11859902 ~ 11890116 (-)
CI01000013_11794495_11842660 C2CD5 coding downstream 127875 11794082 ~ 11842675 (-)
CI01000013_11776137_11791017 LMF2A coding downstream 179533 11775874 ~ 11791017 (-)
CI01000013_12040713_12093531 OTOGL coding upstream 27177 12040688 ~ 12093531 (-)
CI01000013_12104212_12115389 NA coding upstream 90180 12103691 ~ 12115604 (-)
CI01000013_12125008_12129746 NA coding upstream 111012 12124523 ~ 12130312 (-)
CI01000013_12139350_12155896 NA coding upstream 125755 12139266 ~ 12158266 (-)
CI01000013_12180062_12209369 GLG1 coding upstream 166028 12179539 ~ 12209369 (-)
G85718 NA non-coding downstream 4224 11961438 ~ 11966326 (-)
G85715 NA non-coding downstream 15433 11954071 ~ 11955117 (-)
G85712 NA non-coding downstream 16538 11947370 ~ 11954012 (-)
G85481 NA non-coding downstream 119351 11848267 ~ 11851199 (-)
G85454 NA non-coding downstream 195116 11770749 ~ 11775434 (-)
G85769 NA non-coding upstream 102858 12116369 ~ 12116730 (-)
G85776 NA non-coding upstream 109980 12123491 ~ 12123821 (-)
G85780 NA non-coding upstream 118343 12131854 ~ 12132069 (-)
G85781 NA non-coding upstream 119000 12132511 ~ 12132736 (-)
G85798 NA non-coding upstream 150186 12163697 ~ 12163938 (-)
CI01000013_11596784_11604320 NA other downstream 369294 11596688 ~ 11604865 (-)
G85401 NA other downstream 935084 11035032 ~ 11035466 (-)
G85188 NA other downstream 1375213 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 1398110 10563459 ~ 10569290 (-)
G85170 NA other downstream 1489850 10479861 ~ 10480700 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location