G418116


Basic Information

Item Value
gene id G418116
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 872670 ~ 875249 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU480282
TGTCTGTGGAACTTTTACACACAAATATTGGGCAACTGTAAATAAGCATCACACATTTCAGCATGTACTTTGGTGTGGATATCCACCAGAAGACGCCTAGAGCTCAACCGATTCCAGTTATCACACCCACGTATTTATAATGCACTGTTATTCACCATAACATAGGAGTATCAGTCATGCTAGGTTGGCTGCTCCCTGGTTGCATGTCTGACATATTTTTGCAGCTTAAACAGGAGTAAACACACCTTTCCTATGTCAACTATAACTGAAAAACAACAGCAGACTTGTGTGCAGGCAGGGAGCCACCAACACACGACTGGAACGCAGGCTTACGGTCACACAGTTGAGCGCCTGGACGTATGCATGATTTACAGTTACGCAAAACTGCTTGCGTTGAGAACGGGCATCATGAGATTGATGACGGCGTCTGGTCTCGGGTTTGCTCTACTGTTTCCATTGTCATTCAGCATGCATGCAGCTAGGGTCCAGAACAGCACCTTTATAAGTTCTCATATAGCACCATTTTTTCATATATATATATGTGTGTGTGTGAAGTTTGTCAGGACCCTACTGTTGGCATGCACAAACGTCAATTTTAAACTTCATAGTTCTCCATATATGAATCCTACATATTTCAACCTTACATTACAAGGCAAATCAGGAATATTCATACTGTACCATACATGTTAAACAGAAACTAATACAGTACTCACATTAAAGAAAGTGCTACTAGACAGAACCATTTCTTTCTTGTTTTTGAGTCGTATAATATTAAAAGGCTCTACAGGAGGACACACTACATTACATTATCTAAAGGTACACAAAAACATCTTTTAAAAATTTCGCCATCTTTTAAAATCATTTATCAAACACTGACACGTCTTAATTCCAACTGCAAATGGTCAACACAAAGATAAAAAAGGAACAACTCAAGAAAGCTTGTGAACAACCACTCTGTTTTCTTTTTTTAGAACATTACATTACCCACACAACTACCAAGAACAAATACAGAAGTTTATGCATCTCTGCTCTGATATTTCCAGAACTAAAATATTTTACTTTTTGACTCTGTGTTATTGTTCATTTTATTTGCGAGATCATGTTATCGCATTCGAAATACTTTTTTCCCCGTTTCTTTTGTTTTCTTAGATCATGCGTACAAAATGTTACGTTTTAGAGATGAAGGCAAACTACGTTGGAGCAACAATTTGTAACCCTAAATTCAATCATTACAACCACAGTGTAATGATTTTAAGGCCTACGGGTTGACTTCAGTACATGTTATGCATAACAGTCCAATTTCATGAATTCAAGTGTTTAGAGTAACTTGGATATAGCTGCAATACAATAGCATTTTGAGATGGCCTTATAAATTGACATAGCTGTTTCTTCTAACACTACAGAAAAATAGACAGCAGTCTTCCCAATAATTGCTTTTTAAAATGAAATCAGCCATTTTATCTGGGTGATAAAACTGTGTACACTAGCAATAATTATATACCACCTATACATAAAGCAAGAAAAACATCATACGAACACTGCTCTCTTCTGGTCATGCATTGCACATACACGTATAACAAGCATACTTCTACTCATTTTCTTTGTTGGGAACAAACCTGTACTCAGATTTTTAAAGTGCACACGGTTCATCCATTTCACGCCAGCTTTTATACTGCTTCATAGGTAAAAGAAAAATAACTTGCCGCTGCCATTCAAGGGTTACTTTATGAATATTTTGATGCCCTTGGAAGAGAAAAAGGGGGAGATAACAACTGCCTCATCATTCCTACCTTCTAAATACAGGTAATCTGAATACTAGGCATTATGACCCACACTAGTATATTCTGCCTCCTATAGCAGCCCTTATTGTAAGAAATCTGTGTGCAGACAGTCATAGGAAACGAACCAACAATGAGAACAATATAATCACAGACTGAATACTTGGTGTCAGTGATACGCTAATTAGACACATCGCAACCAAATGTGATCGAAATAAACCAAGAAGTGCAAAGAGCAAACAGATGAATGCACTTCTGAAAGGCTGAGGTGTTCATTTGGGAGCACGATTGTCACTCTTCTCACATGGGGCATAAACGAAGGTCCTCTTTGCAGTGGTGAAGCAGCTCAAAGTGCTGTTTAAATAAAGTGCTTCCTGTAGGAGGTGTCTGTTATAGATCAGCATCTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTCATGTCATTCCACACCCGTAAGACCTTCGTTCATCTTTGGAACACAAATTAAGATATTTTTGTTGAAATCCGAGAGCTTTCTGACTCCTCCATAGACAGCAATTTAACCACCAATTTCAAGGTCCAAAAAAGTACGAAAGACATCGTTAAAATAGTGACTGCAGTGGTTCAAACTTCATTTTATAAAACGACGAGAATACTTTTTGTGCACAAAAATGAAACAAAAATAACGACTTTGTTCAACAATATCCTCTCTTCTGTGTCATTCTCATACGCTGTTTACGTTCAGCGCTTCCAGGTTCTACATCAGAACGCCGACTCATTATTGGCTAGCTCCTGCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480282 True 2580 TUCP 0.38 1 872670 875249

Neighbor

gene id symbol gene type direction distance location
CI01000304_00846138_00850133 NA coding upstream 22291 846059 ~ 850379 (+)
CI01000304_00772995_00827316 CHSY3 coding upstream 45062 771033 ~ 827608 (+)
CI01000304_00757894_00760456 NA coding upstream 112010 757894 ~ 760660 (+)
CI01000304_00728178_00731945 ISOC1, ISOC1.L coding upstream 140396 727956 ~ 732274 (+)
CI01000304_00695426_00725459 SLC27A6 coding upstream 147211 694461 ~ 725459 (+)
CI01000304_00884782_00917034 WRN coding downstream 9241 884490 ~ 917034 (+)
CI01000304_00933179_00942864 NA coding downstream 56549 931798 ~ 943865 (+)
CI01000304_00962923_00975418 NA coding downstream 87504 962753 ~ 975644 (+)
CI01000304_00983004_01018406 NRG1 coding downstream 107663 982912 ~ 1018693 (+)
CI01000304_01173248_01184405 SH2D4A coding downstream 296888 1172137 ~ 1184529 (+)
G418156 NA non-coding upstream 179067 693350 ~ 693603 (+)
G418149 NA non-coding upstream 205187 666617 ~ 667483 (+)
G418148 NA non-coding upstream 208053 664260 ~ 664617 (+)
G418145 NA non-coding upstream 218767 653652 ~ 653903 (+)
G418142 NA non-coding upstream 228109 644260 ~ 644561 (+)
G418180 NA non-coding downstream 51256 926505 ~ 926772 (+)
G418192 NA non-coding downstream 169667 1044916 ~ 1045411 (+)
G418195 NA non-coding downstream 172149 1047398 ~ 1047599 (+)
G418196 NA non-coding downstream 173009 1048258 ~ 1048495 (+)
G418197 NA non-coding downstream 174370 1049619 ~ 1049865 (+)
G418059 NA other upstream 308219 558092 ~ 564451 (+)
G417987 NA other upstream 644817 226703 ~ 227853 (+)
G418981 NA other downstream 1217245 2092494 ~ 2093678 (+)
G420445 NA other downstream 3428087 4303336 ~ 4303832 (+)
CI01000304_05173869_05175309 NRARP, NRARP.L, NRARPA, NRARPB other downstream 4297974 5173426 ~ 5176791 (+)
G421162 NA other downstream 5365984 6241233 ~ 6242997 (+)
CI01000304_07352697_07354032 NA other downstream 6477400 7352621 ~ 7354396 (+)

Expression


Co-expression Network