XLOC_012638


Basic Information

Item Value
gene id XLOC_012638
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 11264335 ~ 11269349 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026873
GTAAGGAGTAACTGCTATTATAATGAAAATTCTTTACAATTCATTTTTGACCAATAGATGTCTGCCACCACTGCTAATCTTGAAAAGATGGGTAACCTGCCTGTGACTCCTCATTTGATTCTGCCTGGTTCAGATGATACTTTGGGCCAGTGGATAAAACAATGGATGATCAGCATGGAAGGCAGAGTAATCTGTGAGGGTGAGCATGCACACTGGAATTCCTTCAAAGatGCTTTGCTGGCATAAATCCAGAGAGGGGAACCAAGGCTGTGAGAGGAAATGTGACGTCAAAAACAACTGGCAAGACAGTTCAGAAGAAGACCATGACTGTAAACCCCAAGGTTTCAAACCTTTTAAAGAAACTAATGGACTTTGAATGGgactttatttaaaatgcagcTAGCTTGAACCCCCTACTTTTGcaacacagaggcctttttttctttatttgctgaaGCTCATTTTGgggctatatatttttatattttatatccaaGACTAAATTGTAAAGTggct

Function

GO:

id name namespace
GO:1905368 peptidase complex cellular_component
GO:1905369 endopeptidase complex cellular_component
GO:0000502 proteasome complex cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026873 True 516 lncRNA 0.39 3 11264335 11269349

Neighbor

gene id symbol gene type direction distance location
XLOC_012637 ttc38 coding upstream 304906 10926197 ~ 10959429 (+)
XLOC_012636 mical3a coding upstream 342395 10784730 ~ 10921940 (+)
XLOC_012635 NA coding upstream 522172 10713532 ~ 10742163 (+)
XLOC_012634 lepa coding upstream 573970 10689772 ~ 10690365 (+)
XLOC_012633 BX927136.1 coding upstream 593597 10670661 ~ 10670738 (+)
XLOC_012639 BX936417.1 coding downstream 187864 11457213 ~ 11457330 (+)
XLOC_012640 PRMT8 coding downstream 237212 11506561 ~ 11549906 (+)
XLOC_012641 NA coding downstream 392228 11661577 ~ 11694268 (+)
XLOC_012642 CABZ01026684.1 coding downstream 561556 11830905 ~ 11831020 (+)
XLOC_012643 tmtc2b coding downstream 589048 11858397 ~ 11909472 (+)
XLOC_012632 NA non-coding upstream 614022 10649872 ~ 10650313 (+)
XLOC_012631 NA non-coding upstream 628011 10632783 ~ 10636324 (+)
XLOC_012630 NA non-coding upstream 1074133 10102941 ~ 10190202 (+)
XLOC_012645 NA non-coding downstream 761059 12030408 ~ 12033482 (+)
XLOC_012648 NA non-coding downstream 1091130 12360479 ~ 12362826 (+)

Expression


Co-expression Network