G419640


Basic Information

Item Value
gene id G419640
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 2803579 ~ 2803788 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU482017
CGAGCAAAGAATATACACTAACAAGAAGCGACACTCAATAGAACGTTCCATTGCAACACCGGCGCCCAGCAGCAGCCCTGCGTTTCCGCCATTTTGGGGTGAAAGCGAGTCGACAGTCCACTAGTTTCTATGGTAATATCAGCTGCTTTGTTAAAAAAACATACATTAAAGCTGAAATCCAACCTGAATGATGACAACACAGAATAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU482017 True 210 lncRNA 0.43 1 2803579 2803788

Neighbor

gene id symbol gene type direction distance location
CI01000304_02694838_02711363 NA coding downstream 92077 2694660 ~ 2711502 (-)
CI01000304_02595522_02611332 GRIN3A coding downstream 192247 2595522 ~ 2611332 (-)
CI01000304_02314977_02384157 NA coding downstream 419422 2314977 ~ 2384157 (-)
CI01000304_02299398_02304171 NA coding downstream 498417 2299143 ~ 2305162 (-)
CI01000304_02244094_02244588 NA coding downstream 558991 2240069 ~ 2244588 (-)
CI01000304_02900497_02900924 NA coding upstream 96011 2899799 ~ 2902102 (-)
CI01000304_03158811_03160301 NA coding upstream 354705 3158493 ~ 3160301 (-)
CI01000304_03214897_03241215 MUSK coding upstream 409695 3213483 ~ 3241215 (-)
CI01000304_03268621_03269674 NA coding upstream 464833 3268621 ~ 3270242 (-)
CI01000304_03305219_03313206 NA coding upstream 501431 3305219 ~ 3313398 (-)
G419524 NA non-coding downstream 165755 2637538 ~ 2637824 (-)
G419499 NA non-coding downstream 213280 2589967 ~ 2590299 (-)
G419498 NA non-coding downstream 214396 2588293 ~ 2589183 (-)
G419497 NA non-coding downstream 217866 2585405 ~ 2585713 (-)
G419479 NA non-coding downstream 254469 2548541 ~ 2549110 (-)
G419756 NA non-coding upstream 85497 2889285 ~ 2894489 (-)
G419777 NA non-coding upstream 137911 2941699 ~ 2941947 (-)
G419783 NA non-coding upstream 159802 2963590 ~ 2963803 (-)
G419840 NA non-coding upstream 275578 3079366 ~ 3079602 (-)
G419842 NA non-coding upstream 281631 3085419 ~ 3086625 (-)
G419354 NA other downstream 537338 2262502 ~ 2266241 (-)
G419353 NA other downstream 567473 2229384 ~ 2236106 (-)
CI01000304_04263955_04264962 NA other upstream 1459957 4263846 ~ 4265201 (-)
CI01000304_04661808_04672936 PPWD1 other upstream 1858028 4661766 ~ 4672947 (-)
CI01000304_06480836_06483554 SUB1L2, SUB1A, SUB1 other upstream 3673663 6480743 ~ 6483986 (-)
G422354 NA other upstream 3827298 6631086 ~ 6631499 (-)
G422378 NA other upstream 3940891 6744679 ~ 6783046 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026086 NA non-coding NC_007114.7 CM002887.2 7819453 ~ 7821608 (-)