G426778


Basic Information

Item Value
gene id G426778
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14842872 ~ 14843078 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490011
GTTTCACAAAATGTTAGTAAATTACAGGGCAATTTAAAAAGACCTGGTGCCACTATTGCATCCATCCAGCCGGCAGACACATGCATTTCTATTGTTCAAAAATAGCAGCCTCCACTATCACTCACACAGTCTGCTGTAGTCAGTTAGGAATTAATTTGAGTCCTGACCCTGAAGCAACTGGACTGGATATGATGACAAATCTCATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490011 True 207 lncRNA 0.41 1 14842872 14843078

Neighbor

gene id symbol gene type direction distance location
CI01000304_14695603_14740389 NTM coding upstream 101793 14695603 ~ 14741079 (+)
CI01000304_14356867_14373980 NA coding upstream 468206 14356586 ~ 14374666 (+)
CI01000304_14352375_14355516 HSP70, HSP7C, HSPA8, HSPA1L.S coding upstream 487356 14352375 ~ 14355516 (+)
CI01000304_14331169_14331855 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding upstream 510899 14331064 ~ 14331973 (+)
CI01000304_14304022_14317252 HYOU1 coding upstream 524847 14304022 ~ 14318025 (+)
CI01000304_15034188_15038152 TMEM218 coding downstream 189139 15032081 ~ 15038498 (+)
CI01000304_15040739_15045239 NA coding downstream 197474 15040552 ~ 15045257 (+)
CI01000304_15047768_15063987 ROBO4 coding downstream 204690 15047768 ~ 15064170 (+)
CI01000304_15140709_15147357 NA coding downstream 297483 15140561 ~ 15147557 (+)
CI01000304_15148523_15151340 NA coding downstream 304756 15147834 ~ 15151395 (+)
G426776 NA non-coding upstream 788 14841809 ~ 14842084 (+)
G426740 NA non-coding upstream 1138 14835326 ~ 14841734 (+)
G426723 NA non-coding upstream 85135 14757084 ~ 14757737 (+)
G426649 NA non-coding upstream 311449 14419115 ~ 14531423 (+)
G426644 NA non-coding upstream 403874 14434227 ~ 14438998 (+)
G426779 NA non-coding downstream 622 14843700 ~ 14843905 (+)
G426780 NA non-coding downstream 1139 14844217 ~ 14844455 (+)
G426781 NA non-coding downstream 1647 14844725 ~ 14844991 (+)
G426784 NA non-coding downstream 4534 14847612 ~ 14847848 (+)
G426787 NA non-coding downstream 8089 14851167 ~ 14851385 (+)
G426312 NA other upstream 511986 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1264025 13578049 ~ 13595097 (+)
G425718 NA other upstream 2403786 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4287168 10555216 ~ 10572164 (+)
G424251 NA other upstream 4649977 10188822 ~ 10189404 (+)
G426828 NA other downstream 105812 14948890 ~ 14950592 (+)
G427860 NA other downstream 1042376 15885454 ~ 15889591 (+)
G428017 NA other downstream 1240152 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1661784 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1912868 16761372 ~ 16765057 (+)

Expression


Co-expression Network