Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000306_01927392_02010649 |
| gene name | FLNB |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 1927333 ~ 2010774 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| flnb | Predicted to enable actin binding activity. Predicted to act upstream of or within actin cytoskeleton organization and cell differentiation. Human ortholog(s) of this gene implicated in Larsen syndrome; bone development disease (multiple); cleft palate; and spinal disease (multiple). Orthologous to human FLNB (filamin B). |
| id | description |
|---|---|
| K04437 | FLNA; filamin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000306_01927392_02010649.mRNA | True | 8929 | mRNA | 0.53 | 52 | 1927333 | 2010774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_01905901_01906725 | NA | coding | downstream | 20313 | 1905698 ~ 1907020 (-) |
| CI01000306_01859514_01870761 | NA | coding | downstream | 56511 | 1859005 ~ 1870822 (-) |
| CI01000306_01826418_01844251 | MFN1B | coding | downstream | 83082 | 1826097 ~ 1844251 (-) |
| CI01000306_01792788_01804803 | ASPSCR1 | coding | downstream | 122530 | 1792788 ~ 1804803 (-) |
| CI01000306_01775235_01776152 | NA | coding | downstream | 150901 | 1775197 ~ 1776432 (-) |
| CI01000306_02022802_02080261 | SLMAP, SLMAPA | coding | upstream | 12028 | 2022802 ~ 2080261 (-) |
| CI01000306_02107105_02108186 | ARF4B, ARF4 | coding | upstream | 96120 | 2106894 ~ 2108266 (-) |
| CI01000306_02123270_02125888 | PDE12 | coding | upstream | 111942 | 2122716 ~ 2126015 (-) |
| CI01000306_02130408_02134817 | ATP6AP1L, ATP6AP1LA | coding | upstream | 119035 | 2129809 ~ 2134817 (-) |
| CI01000306_02244385_02249335 | TRIB3 | coding | upstream | 232614 | 2243388 ~ 2249335 (-) |
| G431777 | NA | non-coding | downstream | 2783 | 1902648 ~ 1924550 (-) |
| G431935 | NA | non-coding | downstream | 5748 | 1915554 ~ 1921585 (-) |
| G431933 | NA | non-coding | downstream | 28226 | 1898865 ~ 1899107 (-) |
| G431751 | NA | non-coding | downstream | 29001 | 1856797 ~ 1898332 (-) |
| G431949 | NA | non-coding | upstream | 92021 | 2102795 ~ 2105789 (-) |
| G431954 | NA | non-coding | upstream | 101875 | 2112649 ~ 2113064 (-) |
| G431710 | NA | non-coding | upstream | 130900 | 2141674 ~ 2142335 (-) |
| G431957 | NA | non-coding | upstream | 132868 | 2143642 ~ 2143870 (-) |
| G431968 | NA | non-coding | upstream | 173047 | 2183821 ~ 2220976 (-) |
| CI01000306_01723684_01726043 | MAFGA, MAFGB, MAFG | other | downstream | 178383 | 1717933 ~ 1726043 (-) |
| G431814 | NA | other | downstream | 614899 | 1311702 ~ 1312434 (-) |
| G431706 | NA | other | downstream | 763995 | 1163027 ~ 1163338 (-) |
| CI01000306_00482506_00494090 | PFKLB, PFKL | other | downstream | 1443684 | 482482 ~ 494090 (-) |
| G432022 | NA | other | upstream | 989462 | 3000236 ~ 3003891 (-) |
| CI01000306_04544349_04545034 | NA | other | upstream | 2531949 | 4542723 ~ 4545244 (-) |
| G433450 | NA | other | upstream | 3350869 | 5361643 ~ 5383763 (-) |
| G433670 | NA | other | upstream | 4030240 | 6041014 ~ 6041283 (-) |
| G433985 | NA | other | upstream | 4185333 | 6196107 ~ 6197210 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_004355 | FLNB | coding | NC_007122.7 | CM002895.2 | 42150896 ~ 42230491 (-) |
| bowfin (Amia calva) | AMCG00017021 | flnb,LOC107712990,LOC107657976,LOC107680511 | coding | CM030122.1 | CM030122.1 | 42156679 ~ 42210307 (+) |
