CI01000306_08571500_08571802


Basic Information

Item Value
gene id CI01000306_08571500_08571802
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 8570585 ~ 8572166 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_08571500_08571802.mRNA
GTATAAGAATGAAGATGTTTGACTTGGCCTGGACCAGAAGGAAGTTTAAATTCAGCAAAAATGTTCCACTTCACTGATGCTTGTTATTATTAAAGAACAGAGTTTTGAAGACCACGCTGGAAGGGTTGAGCCTCAATAAGCTCTCAAAACAAAAACGTGAGGAAAGGGTTTGATTTCATTTGACATACTTTTTCCATTCACGTGTCCATTGTGACATACTATTATAGTTTTGATTGTGACGTGAGTGTGGAGGGAAGATTTGCACTTATGAGAAGAACAGATGTCTGCATCATAGTCCTTTACTAAAAAGGACGCCACAGGCAGAATTGCCACATCATCCTTACAATGAAAACAATGCCCTCCTTAAATAAACACAAGCACCTAAAAAAGGCCTCAGGAAATGAGAATGGAGGAGAAGCGCTTCGTCAGCGACAAAGATTTTCAAAGTGCTGAAGCCTGAGCCTAGCAGGTTTTTCGCGAGAGTTCCTGTCTGTATCCTGTGACATGTCGACAGCTAATTTATGGTCACGGACATCCAAGAAGGAGATCTCTGGTGGCCATTGGTGATGGGGAAAAAATGACTAAAGTAAATAAAATTGGAGAAAAAAATTAGGAATAAATAAATTAAAAAAACAAAAAAAACAAAAAATAAATAAATAATTAATGGCTAATTTATGGTAGCGGACATCCAGAAAGGTGATCTCTACTGGCCCCTGGAGGTGATGGGATAAATAAATAAATAAAATAATAAATAAAAATGATTAAATGAACTAAAAAAAGAATTACAAAAATGGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAGCACTAAATGTCTGAAACTAGCAGGTTTTTTCCGTCAAGAGTTCCCGCCTGTATCCTGTGACATGTTGACGGCTAATTTACAGTCATGGACATCCAGGAAGGTGATCTCTTATGGCTCCTGGAGGTGATGGGAAATGTTCTGGTGAAAGCCTCCGACTGCTGGGCTATCACAACAGAGGCTAAGGGGTCACGGCACGGCAGAGGTGCCCGTGGAATTGTTCCTCCGTTTCCTCTGAGGCAGACGGAAAGGAATGCTAAAAGTGACAGAAGCCATTGTGAGGAAGTTCTATCCCTCGGCTACTCTCCCGCTGATGCATGCGTTTACCGCCCGCTGCTGGGTCTCTATACCACTGCCTCAGTGCTTGTCACTCCAACCTATGGGACCTGAAGAGTCTGCATGACTGTTGCTTTTGTAAAATGGAAAAGTTTATATATAGAATGACTCTTTTCACACCATCCATCCTATAAGACCTATAAGGGCCAATGCATGAGAGAAAGCCAACATTAGTGTTAGATTTGGCATATTCTTTGGGTGCGATCAGGGCTTCATATGTTCCGTTTCCCAGGCCAGACAGGAAGGAAGCAGGATTAGGATTGAGTCAACATGTTCATCTATTTTGCCCAGTCGCTCTTCCTCTCCATTTACGCAAGCGCTCATCTGAGAATGAGGCGATTAGCTGTGGACAAACTGCATTGTGGTTTGGTGCACCATACTTTCACCTGGCACCACACACATACGGCCTCCCATGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_08571500_08571802.mRNA True 1582 mRNA 0.42 1 8570585 8572166

Neighbor

gene id symbol gene type direction distance location
CI01000306_08508559_08518460 CAMKVA, CAMKVB, CAMKV coding upstream 51234 8508559 ~ 8519351 (+)
CI01000306_08388107_08410565 MST1R, MST1RB coding upstream 158822 8387407 ~ 8411763 (+)
CI01000306_08378026_08379833 NA coding upstream 190569 8377980 ~ 8380016 (+)
CI01000306_08372816_08373112 NA coding upstream 196463 8372586 ~ 8374122 (+)
CI01000306_08354856_08360499 MON1A coding upstream 209769 8354856 ~ 8360816 (+)
CI01000306_08599141_08604219 NA coding downstream 26819 8598985 ~ 8604309 (+)
CI01000306_08866470_08867329 NA coding downstream 294262 8866428 ~ 8867766 (+)
CI01000306_08871809_08919326 NA coding downstream 299643 8871809 ~ 8919997 (+)
CI01000306_08932674_08949522 GRM2B, GRM2A, GRM2 coding downstream 360302 8932468 ~ 8949738 (+)
CI01000306_08966130_08967440 NA coding downstream 392936 8965102 ~ 8968176 (+)
G435257 NA non-coding upstream 75809 8491350 ~ 8494776 (+)
G435253 NA non-coding upstream 83957 8481719 ~ 8486628 (+)
G435225 NA non-coding upstream 127170 8442956 ~ 8443415 (+)
G435224 NA non-coding upstream 127957 8442380 ~ 8442628 (+)
G435218 NA non-coding upstream 140251 8429967 ~ 8430334 (+)
G435309 NA non-coding downstream 113122 8685288 ~ 8691090 (+)
G435405 NA non-coding downstream 287423 8859589 ~ 8859917 (+)
G435406 NA non-coding downstream 288496 8860662 ~ 8860878 (+)
G435407 NA non-coding downstream 288836 8861002 ~ 8861251 (+)
G435345 NA non-coding downstream 296311 8868477 ~ 8869824 (+)
G434545 NA other upstream 1450726 7119317 ~ 7119859 (+)
G433724 NA other upstream 2440807 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 2462410 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 2584297 5975822 ~ 5986288 (+)
G432958 NA other upstream 2910416 5658928 ~ 5660169 (+)
CI01000306_09225597_09230504 NA other downstream 653399 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 701733 9263589 ~ 9289035 (+)
G435590 NA other downstream 1140683 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 1288047 9860480 ~ 9865724 (+)
G435639 NA other downstream 1307754 9878664 ~ 9884919 (+)

Expression


Co-expression Network