CI01000306_08508559_08518460 (CAMKVA, CAMKVB, CAMKV)


Basic Information

Item Value
gene id CI01000306_08508559_08518460
gene name CAMKVA, CAMKVB, CAMKV
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 8508559 ~ 8519351 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_08508559_08518460.mRNA
GGCAGGGTGGGCCATGCCATTCGGCTGTTTAAATCCTGGCGAGAAGAAGGACTACAACAGTCCTACAGAAATCACAGACAAATATGATCTGGGGCAGATTGTTAAATCGGAGGAGTTCTGTGAGATCTTCAGGGCGAAGGATAAAAACACTCTGAAAATGTACACCTGCAAAAAATTCCTGAAGAAAGATGGAAGAAAAGTGCGGAAGGCTGCCAAAAATGAGATTGTCATCCTAAAGATGGTAAAACACCCCAACATCCTCCAGCTGGTCGATGTCTACGAGACCCGGAAAGAGTACTACCTCTTCCTTGAGCTAGCCACAGGTCGGGAGGTGTTTGACTGGATCCTGGATCAAGGCTATTATTCTGAGAGGGACACCAGCAATGTTATCAGACAAGTGATGGAGGCAGTTGCTTACCTGCACAGCCTGAAGATCGTTCACAGGAACCTAAAGCTTGAGAATCTGGTGTACTACAACCGACTGAAACATTCAAAAATAGTCATCAGTGATTTCCATCTGGCAAAACTGGAGAATGGACTCATCAAGGAGCCCTGTGGAACCCCAGAGTATCTGGCCCCAGAGGTTGTTGGGAGACAGAGATATGGCCGACCGGTGGACTGCTGGGCCCTTGGTGTGATCATGTACATACTACTCTCTGGAAATCCTCCATTCTACGATGAAGCAGATGATGATGACTATGAAAACCATGACAAGAACCTCTTCCGGAAGATTCTTGCTGGAGATTATGAGTTTGACTCACCATACTGGGATGATATTTCAGACTCTGCTAAAAACTTAGTGTCACGTCTTATGGAGGTGGACCAGGACCAGAGATTGACTGCGCAAGAAGCCATCAACCATGAATGGATATCTGGAAATGCTGCTTCCGACAAGAACATCAAGGAAAATGTGTGCGCACAAATCGAGAAAAACTTTGCAAAAGCTAAGTGGAAGAAAGCCGTACGGGTCACGACCATGATGAAGCGCCTCAGGGCACCAGAGCATCAAACAGCGGCACCAGCAGCAGCAGCAGCTGTACCAGATGCGGCCAACCCTGCAGCAGGGGCTCAGGAAAACCCTCAGGCTCCGTCAGAGGCCTCCACAGCCCAATCGAGTACTGCTGAAAGCAACTCTGCGAGCACAGAAGCCCCTGTTGTGGAAGCTGCTAACGCAGAAGCAGTGGCCGCTGCCGCCCCGCCACCAGCTGAACCTGTTCTCCACGTTCCAGCGCCTGAACAGCCCAATCCCACATCGCGATGCAACGGAGAAGCTTTAGACTCCCTGCCACCAGACACAGGGGAGGAACAGAGCGGTTAATCTCGCTACCTCTCCCACCTGCGTTTAGATCCCACACACGTGTACATAAGCAGCAAGCATGCTAATACTGATTCCGCAGCACATAGCATTAATCTCAACACGCTCTTCCACGAGCCAACTTCTAAAGGCCAATTCACACTGCACCGAGACACGCCGACAGACACTTCATCTGGTTTTTGTCAAATCAGTGTGTTACGGAGTTGGTTGGCTCTCATTTTTGCTGATTGAACATGTTGAATCTGCTTTTGATGGGTGGTGGAATGTCTGAGAAGTGACATACTGTAATATGGTGGTTGTCCGCGTTGGTCGCTGTCTGTCGGTGCAGTGTGAATTGGTCATAAAACATTTCCCAGCAAGCATTCTATTGTTTTCTATTGAATCACAAAGCTGTGTGATGCATATCGAAGTCTCTGGCCACTTTAACTTTACGTAAAAGAAGAAAAAATCTGTTTTCTGCTTACATTAAGCCAAGATTGGAAACTTTAGCATTGATCTGCATATATGATTTAGGATAGATTATCATTGTAGGCCTCATTTTATAGCTACTTTCTTATTTTATTGCATTGCAATTTGTTGACACCTGTCTTGAACTAGTCAGAGGACCACAGAGACACAGCTTCATGTGCAATGTAAAGTTTCTGTACATAGCTTACTTACTTCTGTAGATTAGACGTAGCCAAGAACAGCATGCTTTTTCAAATCTGCTGTTTATGACACACATGTCCAGGTAACTGACACGTTCAGCTTCAGCTTTACATGGACATTTCATGTCTCGATCGAACACGCACTCATGAAACGTTAAGAAGATTTATATAAAAAATACTTCTACAGCAACTAAGGCGGCTAAATTCATCTCGTAATGGTGTTTTAGTGGTTGAGACGTGTGGCCCA

Function

symbol description
camkvb Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in cytoplasmic vesicle membrane. Is expressed in nervous system and neural tube. Orthologous to human CAMKV (CaM kinase like vesicle associated).
camkva Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Orthologous to human CAMKV (CaM kinase like vesicle associated).
camkv Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Predicted to be active in glutamatergic synapse and postsynapse.

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K08812 CAMKV; CaM kinase-like vesicle-associated

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_08508559_08518460.mRNA True 2209 mRNA 0.46 10 8508559 8519351

Neighbor

gene id symbol gene type direction distance location
CI01000306_08388107_08410565 MST1R, MST1RB coding upstream 96796 8387407 ~ 8411763 (+)
CI01000306_08378026_08379833 NA coding upstream 128543 8377980 ~ 8380016 (+)
CI01000306_08372816_08373112 NA coding upstream 134437 8372586 ~ 8374122 (+)
CI01000306_08354856_08360499 MON1A coding upstream 147743 8354856 ~ 8360816 (+)
CI01000306_08295667_08298865 FAM212AA coding upstream 209582 8295667 ~ 8298977 (+)
CI01000306_08571500_08571802 NA coding downstream 51234 8570585 ~ 8572166 (+)
CI01000306_08599141_08604219 NA coding downstream 79634 8598985 ~ 8604309 (+)
CI01000306_08866470_08867329 NA coding downstream 347077 8866428 ~ 8867766 (+)
CI01000306_08871809_08919326 NA coding downstream 352458 8871809 ~ 8919997 (+)
CI01000306_08932674_08949522 GRM2B, GRM2A, GRM2 coding downstream 413117 8932468 ~ 8949738 (+)
G435257 NA non-coding upstream 13783 8491350 ~ 8494776 (+)
G435253 NA non-coding upstream 21931 8481719 ~ 8486628 (+)
G435225 NA non-coding upstream 65144 8442956 ~ 8443415 (+)
G435224 NA non-coding upstream 65931 8442380 ~ 8442628 (+)
G435218 NA non-coding upstream 78225 8429967 ~ 8430334 (+)
G435309 NA non-coding downstream 165937 8685288 ~ 8691090 (+)
G435405 NA non-coding downstream 340238 8859589 ~ 8859917 (+)
G435406 NA non-coding downstream 341311 8860662 ~ 8860878 (+)
G435407 NA non-coding downstream 341651 8861002 ~ 8861251 (+)
G435345 NA non-coding downstream 349126 8868477 ~ 8869824 (+)
G434545 NA other upstream 1388700 7119317 ~ 7119859 (+)
G433724 NA other upstream 2378781 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 2400384 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 2522271 5975822 ~ 5986288 (+)
G432958 NA other upstream 2848390 5658928 ~ 5660169 (+)
CI01000306_09225597_09230504 NA other downstream 706214 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 754548 9263589 ~ 9289035 (+)
G435590 NA other downstream 1193498 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 1340862 9860480 ~ 9865724 (+)
G435639 NA other downstream 1360569 9878664 ~ 9884919 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003593 camkvb coding NC_007122.7 CM002895.2 35364445 ~ 35441348 (+)